Gene Bcav_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3980 
Symbol 
ID7858043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4401997 
End bp4403373 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content73% 
IMG OID643868083 
ProductCerebroside-sulfatase 
Protein accessionYP_002883983 
Protein GI229822457 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3119] Arylsulfatase A and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.459906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGC GCCCGAACAT CGTCCTGATC AACGCCGACG ACCTGGGGTA CGGCGACCTG 
GGGTGCTACG GCTCCATGCG CAACGACACG CCGCACCTCG ACCGGCTCGC CGCTGAGGGA
GTCCGGCTCA CGGACTTCTA CATGGCATCG CCGGTCTGCT CCCCGTCCCG CGGGGGGATG
CTGACGGGCT GCTACCCGCC GCGCATCGGA TTCGGCGAGT TCGTCGGCCG TCCGGTGCTG
TTCCCCGGCG ACCCCGTGGG CCTCGACCCC GCCGAGCGCA CCATGGCCCG GGTGCTCGGC
GACGCCGGGT ACGCCACCGC CGCCATCGGC AAGTGGCACT GCGGCGACCA GCCGGAGTTC
CTCCCGACCC GGCACGGCTT CGACAGCTAC TTCGGCATCC CGTTCAGCAA CGACATGGGG
CGCCAGCGCG AGCACGAGGA CTGGCCACCG CTCCCGCTGA TGTCCGGCGA GAGCGTGGTC
CAGGAGCAGC CCGACCAGCG CTCGCTCACG GAGCGGTACA CGGTGGCCGC GACGCGCTTC
ATCGAGGAGA ACGCCCACCA GCCGTTCTTC CTCTACCTCG CGCACATGTA CGTCCACGTG
CCGCTGTTCG TCCCGGCGCC GTTCCTCGCG GCGTCGCGCA ACGGCGGCTA CGGCGGCGCG
GTCGCCGCCC TCGACTGGAG CACGGGCGTC GTCATGGACA CGCTGCGCCG CCTCGGGCTG
GAGGAGAACA CGATCGTCGT GTTCACGAGC GACAACGGCT CCCGGGCCCG CGGCGAGGGC
GGCAGCAACG ACCCGCTCCG CGGCCACAAG GCGCAGACCT GGGAGGGCGG CCAGCGCGTG
GCGTGCGTGG TGCGCTGGCC CGCCGCGATC CCCGCGGGAG GCGTGTGCGA CGCCGTCACG
CGCTCCATCG ACCTGCTGCC GACGTTCGCC GCCGTCGCCG GCGCGGCGGA CTGGGCGGAT
CCGGCCCGGC CGGTCGACGG CGTCGACCTC ACGGCGCTGC TCACGGGCGC CGGGCCCGCC
CCGAATGAGA CGTTCGCCTA CTACTACATG GACGACCTCG AGGCCGTGCG GGTCGGGGAC
TGGAAGCTCC ACCTGTCCAA GCGCCGCGAC CCGATGCGGG AGCTGTACGA CCTGCGCACG
GACGCCGCCG AGACGCACGA CGTCGCAGCG GACCATCCCG ACGTCGTCGC GCGTCTCGAG
GCCGTCGCCG AGACGATCCG CGCGGATCTG GGAGACGCGC GCCTCGGCGT CGTCGGTGCG
GGACGGCGGC CGCAGGGCCG GGTGGAGGAC GCCCAGCCTC TGACGTCCTA CCGGGAGGAC
CACCCGTACC TCGTCGCGAT GTACGACCTC CCGGACATGC CCACCATGGC GGGCTGA
 
Protein sequence
MTQRPNIVLI NADDLGYGDL GCYGSMRNDT PHLDRLAAEG VRLTDFYMAS PVCSPSRGGM 
LTGCYPPRIG FGEFVGRPVL FPGDPVGLDP AERTMARVLG DAGYATAAIG KWHCGDQPEF
LPTRHGFDSY FGIPFSNDMG RQREHEDWPP LPLMSGESVV QEQPDQRSLT ERYTVAATRF
IEENAHQPFF LYLAHMYVHV PLFVPAPFLA ASRNGGYGGA VAALDWSTGV VMDTLRRLGL
EENTIVVFTS DNGSRARGEG GSNDPLRGHK AQTWEGGQRV ACVVRWPAAI PAGGVCDAVT
RSIDLLPTFA AVAGAADWAD PARPVDGVDL TALLTGAGPA PNETFAYYYM DDLEAVRVGD
WKLHLSKRRD PMRELYDLRT DAAETHDVAA DHPDVVARLE AVAETIRADL GDARLGVVGA
GRRPQGRVED AQPLTSYRED HPYLVAMYDL PDMPTMAG