| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3956 |
|---|
| Symbol | |
|---|
| ID | 7858019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4376688 |
|---|
| End bp | 4377443 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643868059 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_002883959 |
|---|
| Protein GI | 229822433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.189113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAC CGGAGACGCC GCGGGTCGCC GTCGTCGGCG ACGTCGTGCA CCGCCCGGCG
CAGGCGTGGA CCCCGACCGT CCACGCGCTG CTGCGGCACC TGCGTGCCTC CGGGATCGCG
GGGGTGCCGG AGCCGCTCGG CATCGACGGC GACGTAGAGA CCGTGCGCCT GCTGCCCGGC
GACGCGGGGC CGGCGTGCTG GCCGCACCAG GCGAGCGAGC GTGGACTGGC GTCCGCCGCG
CGGCTGCTCC GGCGGGTCCA CGACGTGAGC CGCGGGTGGC AGCCGCCGGC GGGAGCGGGG
TGGGCGCACC CGCCCGCGGC GTCGACCGAC GGGCAGACGC ACGTCATCTG CCACGGCGAC
CCCGGTCCGT GGAACATGAC GTGGGCCGAC GGCGAGGCGA CCGGCCTGTT CGACTGGGAC
CTCGCGTATC CAGGGCCGCC GCTCGACGAC GTCGCGTACG CCCTCGAGTA CTTCGCTCCG
TTCCGGGACG ACGCCGAGGC CGTGCGCTGG CACGGCTTCG CGGCGCCGCC CGACCGCCGG
CGCCGGATCT CCGTGTTCGC GCGCGCCTAC GGGCTGACCT CGACGGACGG CCTGGTCGAC
GCCGTCATCG CCCGGCAGGA GGCGACGATC GCCTATGCGG CCTCGCTCGC CGAGCGGGGG
ATCGAACCGC AGGTCACGTG GGTCGGCGGC GGGCACCTCG ACGTGCTTGC GGCGCGCGTG
GCGTGGTCGC GGGCGAACCG GGGGCTCGTC GAGTAG
|
|---|
| Protein sequence | MSEPETPRVA VVGDVVHRPA QAWTPTVHAL LRHLRASGIA GVPEPLGIDG DVETVRLLPG
DAGPACWPHQ ASERGLASAA RLLRRVHDVS RGWQPPAGAG WAHPPAASTD GQTHVICHGD
PGPWNMTWAD GEATGLFDWD LAYPGPPLDD VAYALEYFAP FRDDAEAVRW HGFAAPPDRR
RRISVFARAY GLTSTDGLVD AVIARQEATI AYAASLAERG IEPQVTWVGG GHLDVLAARV
AWSRANRGLV E
|
|---|
| |