| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3854 |
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| Symbol | |
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| ID | 7860596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 4272592 |
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| End bp | 4274712 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643867958 |
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| Product | dehydrogenase E1 component |
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| Protein accession | YP_002883858 |
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| Protein GI | 229822332 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.886533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.152539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCGA ACATGCTGCA GCTGCTGGAC CCCGACGGGC GACGTCGCGA ATCAGCGGAG
TACGACGGCT GGGTCGAGGA CGTCGACGAC GCGGCGCTGC GCAGCCTCTA CCAGGACATG
GTCGTCGTGC GCCGGCTCGA CGCCGAGGCG ACCGCGCTGC AGCGACAGGG CGAGCTCGCC
CTGTGGCCCC CGCTGCTCGG CCAGGAGGCC GCCCAGATCG GGTCGGCACG CGCGCTGCGC
CCCGGCGACT TCGTGTTCTC GAGCTACCGC GAGCACGCCG TCGCCTACGT GCGCGGCGTC
GCCGTCGTCG ACCTCATCCG GGTGTGGCGT GGGCTGACGG CGTCGGGCTG GGACCCGTTC
GCCGTCAACA TGGCGACCCC GCAGGTCATC ATCGGCGCGC AGACCCTTCA CGCCACCGGG
TACGCGATGG GGGTGACGTT CGACGGCGAG GCCGGCAACG GCGACGTCGC CGTCACGTAC
TTCGGCGACG GTGCCATGAG CGAGGGCGAC GTCAACGAGG CGATGGTCTT CGCCGCCTCG
TTCCGCGCAC CGGTCGTCTT CGTCTGCCAG AACAACCAGT GGGCGATCTC CGAGCCCGCC
GGGCTGCAGT CCCCCGTGCC GTTCGCCGGG CGAGCGGCCG GCTTCGGGAT CCCGAGCGTG
CGCGTCGACG GCAACGACGT CCTCGCGATG CTCGCCGTCA CGCGCGAGGC GGTCGCGCGG
GCGGCGAACG GGGGCGGCCC GACGTTCGTC GAGGCCGTCA CGTACCGCAT GGGGCCGCAC
ACCACCGCTG ACGACCCCAC GCGTTACCGC GACGCCGCAG AGCTGGACGC GTGGCGCCGT
CGGGATCCGA TCACGCGGCT CGAGGCGCAC CTGCGCGGCC CGCGACGCGC TGAGCGAGGA
CGACGCCGCC CGCGTCCGGG CCGCGGCCGA CGCCGCGGCG GCCGAGCTGC GCGCCGGGTG
CATCGGGCTC GCCGACCCGC CGGCCGGCGC GATCTTCGAC CACGCGTACG CGGAGCCACA
CCCTGTGGTG GCGGCCCAGC GTGTGGAGTA CGAACGTTAT GCCGAAGGAT TCGCCGAGGG
AGCCGACGTC GCCGAGGAGG CCGTGCGATG ACCACGACGC TGACGTTGGC CAAGGCGATG
GGCGCGGGCC TGCGCCGGGC GCTCGCCGAC GACGACCGGG TGCTCGTGAT GGGCGAGGAC
GTCGGCCGGC TCGGCGGCGT GTTCCGCGTG ACCGACGGGC TGCAGGCCGA GTTCGGGCCG
CACCGCGTGA TCGACACCCC GCTCGCGGAG GCCGCGATCG TCGGGACGGC GATCGGGCTC
GCGTTCCGCG GCTACCGGCC CGTGTGCGAG ATCCAGTTCG ACGGGTTCGT GTACGAGGCG
TTCGACCAGA TCGTGTCGCA GGTGGCGAAG ATGCACGCGC GCACGAACGG GAAGGTGCGG
CTGCCGCTGA CGATCCGGGT CCCGGTGGGC GGGGGCACGG GCGCGGCGGA GCACCACTCC
GAGTCGCCCG AGGCGTACTT CGCGCACACG GCGGGCCTGC GCGTGGTGGA GGTCAGCAGC
CCGCAGGACG CCGCCACGAT GATCCGGCAG GCGATCGCGT GCGACGACCC CGTCATCGTG
TTCGAGCCGA AGCGGCGCTA CCACGCGAAG GGCGAGGTCG ACCTCGACGT CGACCTCGCG
CAGGCGACGC CGATGACGAG CGCGCGCGTG GTCGCCGAGG GGTCCGACGT CACGCTCGTC
ACGTACGGCG GCCTCGTCCC GGTGGCGCTC GACGCCGCCG TCGCGGCCTC CGACGAGGGC
GTCTCTGTCG AGGTCATCGA CCTGCGGTCG CTGTCGCCCA TCGATCACGA CGCCGTCGCC
GCCTCCGTGC GACGCACCGG GCGACTCGTC GTTGCGCACG AGGGGCCGGG GCAGGCGGGG
CTCGGCGCGG AGATCGTCGC CGTCGCCACG CAGCGCTGCT TCTTCCACCT CGAGGCCCCA
CCCGTGCGGG TGACCGGCTT CGACATCCCG TACCCGCCGG CCAAGCTCGA GGGCCCGCAT
GTGCCCGACC TCGACCGGAT GCTCGACGGC GTCGACCGCG TCCGGTCCGG CGCGCCGGCG
CTCGAGGAGG TGCTCGGGTG A
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| Protein sequence | MEPNMLQLLD PDGRRRESAE YDGWVEDVDD AALRSLYQDM VVVRRLDAEA TALQRQGELA
LWPPLLGQEA AQIGSARALR PGDFVFSSYR EHAVAYVRGV AVVDLIRVWR GLTASGWDPF
AVNMATPQVI IGAQTLHATG YAMGVTFDGE AGNGDVAVTY FGDGAMSEGD VNEAMVFAAS
FRAPVVFVCQ NNQWAISEPA GLQSPVPFAG RAAGFGIPSV RVDGNDVLAM LAVTREAVAR
AANGGGPTFV EAVTYRMGPH TTADDPTRYR DAAELDAWRR RDPITRLEAH LRGPRRAERG
RRRPRPGRGR RRGGRAARRV HRARRPAGRR DLRPRVRGAT PCGGGPACGV RTLCRRIRRG
SRRRRGGRAM TTTLTLAKAM GAGLRRALAD DDRVLVMGED VGRLGGVFRV TDGLQAEFGP
HRVIDTPLAE AAIVGTAIGL AFRGYRPVCE IQFDGFVYEA FDQIVSQVAK MHARTNGKVR
LPLTIRVPVG GGTGAAEHHS ESPEAYFAHT AGLRVVEVSS PQDAATMIRQ AIACDDPVIV
FEPKRRYHAK GEVDLDVDLA QATPMTSARV VAEGSDVTLV TYGGLVPVAL DAAVAASDEG
VSVEVIDLRS LSPIDHDAVA ASVRRTGRLV VAHEGPGQAG LGAEIVAVAT QRCFFHLEAP
PVRVTGFDIP YPPAKLEGPH VPDLDRMLDG VDRVRSGAPA LEEVLG
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