Gene Bcav_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3819 
Symbol 
ID7860558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4238839 
End bp4240701 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content75% 
IMG OID643867922 
ProductHNH endonuclease 
Protein accessionYP_002883823 
Protein GI229822297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA CGCGAGCGGA TGTGACGGCG GCGGTCAGCG ACGGCCTCCA GCCGGAGCCT 
GTCGGCGTCG AAGAGTTCGC CGCGTTGGCC TCGCTGGATG CGCTGCCGGA GCACGACGGC
GGATCGCTCT CGGATGCGCA GGTGCTCGAC GTGGTCGCGG GCTGGGCCGC CGTGGAGGCT
CGGGCGGCCG GGGCGAAGAG AGCGTGGGCG GCGGCGCTGG CTCGGCGTCC CTCCCAGACG
CCCGACTGGC GGGAGCTCCG GCGTCGCGTG TCCGTGCCGT CGGTGGCCGG GGACGAGATC
GCGGTCCGGG TGGGGGTCTC CCGCATGGCG GCCGCTCGAT GGATCGCGGA GGGCGAGCTG
CTCGCGGGGA AGCTGGGCAA CGTCGGTGTC GCCCTCCAGG CCGGAGTGAT CGACGCCGGC
AAGGCGCGCG AGTTCGTCGA CGCGCTGGCC GAGCAGGATC TGCCGGTAGT CCTCGCGGTG
TGCGACGAGG TGCTGCCCGA GGCGCCCACG CTCTCGCAGC GCCAGGTGGC GACGGCGATC
CAGCGCGCAG TCGTGCGCGT CGACCCGCAG GGTGCCTCGG AGCGGCACGA GCGAGCAGCG
CGCAGGCGGT GCGTGGAGCG CGTGCGCGTG CTTCCGGACG GGATGGCTCG GCTGTCAGCC
GTACTGACCG CGGCGCAGGC CGCCGGTGTC TATGCCGCGT GTGAGGCGGC GGCTCGCGCG
AAGCGGGCGG CGGGCGACTC CCGCACGCTG GAGCAGCTCC GGGCGGATGC CCTGGCGGCG
CTCGGCGCTG AGGCGCTCGC GCAGGGGCGG ATCGGGCCCG AGGGGTCGGT CGAGCATCGA
GGAGCTCCGA CGTCGCCGGA GGCTGGGGAC GCCGCCGGAC GCCGTGCGCC TGGTCCCGGC
GCCGACGAGG ATGTGCCGGC GTCGGGCTTG GGTGCGGGGG AGGCTGTGCG GGAATCGGGC
CCGCGTGCGG GGGATGCTCT GGGGGCGTCC GGCCCGCGTG CGGGGAAGAG TGAGCGGGAA
TCGACGACGT CGAGGGAACC GAAGCATCCC CCTCGTTCGG AGTCCCCGGA GGTGGAGTCG
TTCCGGTTCA GCGGGCCGGC CGCCAGGCTC GAGCTCAGTG TCTCGGTCGC GACGCTGAGC
GGGCAGGACT GGGTCGGGAC GGCGCACGAC GTCGCCGAGG ACCTCTGGCC GAGTCGTCTT
CCGGACGATG CGGGCGAGGT CGCGGGTGGG AAGGACGGCG CCGCGGCAGG CGCGCTCGGC
GGCGCCCAGG ATGAGCCCGC ACCGCCGGAG CCTGTGCCGC TGCTGACCGG GTACGGTGCG
GTCGATCCGG CGACGGCTCG GGCGCTAGCG GCCGAGGGCC TGGTCCGGGT CGTGGTGACC
GACGCGGAGC TCGAGGCTTG GCGTCGCGCA ACAGCTGTTC CAGGCGCGGC GACTGAGTGG
GACGCGGGAC GCGAGACGTA CCACCCGCCG GCGGCGCTCG CGCGGCTCGT GCGTGCTCGC
GACGGCACGT GCGTCGCGCC CGGATGCTCC GTACCGGCGA CGTCGTGCGA CCTGGACCAC
GTGGTCTCCT TTCCGCTGGG GCCGACGGAT GCCTGGAACC TGCGGCCGTT GTGTCGACGG
CATCACCTCC TAAAGACCCG CGCCGGTCAT CGGCTCAGCG TGGAAGCCGA TGGCTCGACG
AGCTGGACGA CGCCGTCGGG CGTGGTCCGC CGGCGCGCGA TCGATGGCAC GTGGGCACGT
CGCGATGCTC CCGCCGGTGC GAACCTGCGC CGGGAGCGGC AGGAGGCTCC CGGCGCGGGG
CCGCGCCGGG AGCGGGAGGA CCCCAACGAA GGCACGCAGT CTCCCCGAGC GGCGGCCGCG
TGA
 
Protein sequence
MFETRADVTA AVSDGLQPEP VGVEEFAALA SLDALPEHDG GSLSDAQVLD VVAGWAAVEA 
RAAGAKRAWA AALARRPSQT PDWRELRRRV SVPSVAGDEI AVRVGVSRMA AARWIAEGEL
LAGKLGNVGV ALQAGVIDAG KAREFVDALA EQDLPVVLAV CDEVLPEAPT LSQRQVATAI
QRAVVRVDPQ GASERHERAA RRRCVERVRV LPDGMARLSA VLTAAQAAGV YAACEAAARA
KRAAGDSRTL EQLRADALAA LGAEALAQGR IGPEGSVEHR GAPTSPEAGD AAGRRAPGPG
ADEDVPASGL GAGEAVRESG PRAGDALGAS GPRAGKSERE STTSREPKHP PRSESPEVES
FRFSGPAARL ELSVSVATLS GQDWVGTAHD VAEDLWPSRL PDDAGEVAGG KDGAAAGALG
GAQDEPAPPE PVPLLTGYGA VDPATARALA AEGLVRVVVT DAELEAWRRA TAVPGAATEW
DAGRETYHPP AALARLVRAR DGTCVAPGCS VPATSCDLDH VVSFPLGPTD AWNLRPLCRR
HHLLKTRAGH RLSVEADGST SWTTPSGVVR RRAIDGTWAR RDAPAGANLR RERQEAPGAG
PRREREDPNE GTQSPRAAAA