Gene Bcav_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3802 
Symbol 
ID7860541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4220297 
End bp4221289 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content74% 
IMG OID643867905 
ProductABC transporter related 
Protein accessionYP_002883806 
Protein GI229822280 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.550833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGA TCCACGTCCA CGAGCTGCGC AAGCGGTACG GACCGCGCGT CGCCGTCGAC 
GGCGTCGGCC TCACGGTGCG GCCGGGCGAG GTGTTCGGGA TCCTCGGCCG CAACGGCGCC
GGCAAGACCA CGACCGTCGA GGCGATCGCC GGCCTGCGAC GGCCCGACGC CGGCACGGTC
CGCGTGCTCG GCCTCGACCC GTGGCGCGAC CGGCTGCGCC TGCGGCAGGT GCTCGGCGTG
CAGCTCCAGG ACACCCAGCT CCACCACGCG CTGACCGTCC ACGAGCTGGT CCGCCTGTAC
CGCACGTTCT ACGCCAGCGG CGCCGTCGTC AGCGACCTCA TCGAGGCCGT CGGCCTCAGC
ACCCACCGCG ACGTGCGCTT CGAGCGGCTC TCCGGTGGCC AGCAGCAGCG GCTGTCGATC
GCGCTGGCGC TGGTCGGCCG GCCGCGCGTC GTGATCCTCG ACGAGCTCAC GTCGGGCCTC
GACCCCGAGG CTCGGCGCCA CATCTGGGCG ATCGTGGAGG ACCTGCGCGA CGACGGCGTC
ACGGTGCTCC TGGTGAGCCA CCTCATGGAG GAGGTCGAGC GGCTGTGCGA CAGGGTCGCG
CTGCTCGAGC GCGGGAGGTT GGTCGCGACT GACACGCCCT CGGGCCTCGT CGAGCGCGCG
GGCCTCGGCC AGCGCGTGCG GTTCCGGGTG GCGTCGGGTG CACCGTTCGA CGCCGGTCTG
GTGCGGGACC TGCCCCAGGT CGAGCAGGTG GAGGTCCGCG GCGACGAGGT GAGCGTGCAC
GGCGGCGGCG ACCTGCTCGG TGAGGTGAGC ACCGCCCTCG TGCGCGCGGG GGTGGTCGCG
ACCGAGACGC GCCTCGAACG AGCCACGCTC GACGACGCGT TCCTCGCGCT CACCGGGAGC
GCGCTCGAGA ACACCGATGC CGACGGCGAT CCCGACGCCG GCGGCGACGC CGGCCCGCGC
GTCGCCCGCC ACAACCAGGA GGTCTCCCGA TGA
 
Protein sequence
MTAIHVHELR KRYGPRVAVD GVGLTVRPGE VFGILGRNGA GKTTTVEAIA GLRRPDAGTV 
RVLGLDPWRD RLRLRQVLGV QLQDTQLHHA LTVHELVRLY RTFYASGAVV SDLIEAVGLS
THRDVRFERL SGGQQQRLSI ALALVGRPRV VILDELTSGL DPEARRHIWA IVEDLRDDGV
TVLLVSHLME EVERLCDRVA LLERGRLVAT DTPSGLVERA GLGQRVRFRV ASGAPFDAGL
VRDLPQVEQV EVRGDEVSVH GGGDLLGEVS TALVRAGVVA TETRLERATL DDAFLALTGS
ALENTDADGD PDAGGDAGPR VARHNQEVSR