Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3792 |
Symbol | |
ID | 7860531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4208095 |
End bp | 4208952 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643867895 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002883796 |
Protein GI | 229822270 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.168129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGATGG CGCTCCCGGC CATCATCGGG TTCGTCGCGT TCACGCTGGC CCCGATGATC GCGTCCCTGT TCATCAGCCT GACTGACTGG ACGATCGGTG CCGCCCCGCA GTTCGTCGGC GTCGAGAACT ACGTGCGGAT GTTCTCCGCT GACTCGAGCT TCTTCTCGTC GCTCTGGGCG ACGGTGTACT ACACGCTCGG TGCGGTTCCG CTGTCGATCA TCGTGGCGTT CGTCGTCGCG CTGCTGCTCA ACGCGAACGT CCGGGGCCAG AGCGTCTTCC GCGTCATCTA CTACATCCCC GCGATCGTGC CGATCGTCGC GAACAGCATG CTGTGGATCT GGCTGTTCAA CCCGGACTTC GGGCTCCTGA ACTCGGCCCT GGCGCGCGTC GGTCTCCCGG GGTCGGACTG GATCTTCGCC GAGGAGACGG CGGTTCCGTC GCTCATCCTC ATGGCGACGT GGGGCTTCGG GAACATCGCC GTGATCTTCC TCGCGGGGCT CCAGGGGGTG CCGCGGCACC TGTACGAGGC GATCTCGGTG GACGGCGGCG GCGCGTGGAG CAAGTTCCGG CACATCACGT TGCCGATGAT GACGCCGGTC ATCTTCTACA GCGTCGTGAC CGGCGTCATC GGGGCGTTGC AGGTGTTCGT CCAGGCCGCC GTCATGACGG AGGGCGGGCC GAACGACGCC ACGCTGTTCT TCGTCTACTA CCTCTACCGC ACGGCCTTCA CGAACAACGA GATGGGCTAC GCCAGCGCGC TCGCCTGGAT CCTGTTCCTC ATCATCATGG CGATCACCGT TCTCCTCTTC CGCAACTCCA ACAAGTGGGT CTACTACGAG GCAGGGACGG GACGATGA
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Protein sequence | MMMALPAIIG FVAFTLAPMI ASLFISLTDW TIGAAPQFVG VENYVRMFSA DSSFFSSLWA TVYYTLGAVP LSIIVAFVVA LLLNANVRGQ SVFRVIYYIP AIVPIVANSM LWIWLFNPDF GLLNSALARV GLPGSDWIFA EETAVPSLIL MATWGFGNIA VIFLAGLQGV PRHLYEAISV DGGGAWSKFR HITLPMMTPV IFYSVVTGVI GALQVFVQAA VMTEGGPNDA TLFFVYYLYR TAFTNNEMGY ASALAWILFL IIMAITVLLF RNSNKWVYYE AGTGR
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