Gene Bcav_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3779 
Symbol 
ID7860518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4193168 
End bp4195741 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content75% 
IMG OID643867882 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_002883783 
Protein GI229822257 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CCGCCGTCGA CCCCGGCTCC GCGCCGTCCG CGGGCGCGGA GCCGGGCAGG 
CGCCCGGGGC GGCTCACCGT GTACCTCGGT GCCGCCCCGG GCGTCGGCAA GACCTACGCC
ATGCTCGACG AGGCGCAACG CCGCCGCTCG CGCGGCACGG ACGTCGTCGT CGGCCTCGTC
GAGACCCACG GCCGGGCCGC GACGCTGGAG AAGATCGGCG ACCTCGAGAT CGTGCCGCGC
CGTGTGGTGC GGCACCGGGG TGTCGAGCTG ACAGAGCTCG ACACCGAGGC CGTGATCGCC
CGCGGGCCTG AGGTCGCGCT GGTCGACGAG CTCGCCCACA CGAACGCGCC CGGTTCGCCG
CACCCGAAGC GGTGGGAGGA CGTGGCCGAC CTGCTCGCGG CGGGCATCGA CGTCGTCACG
ACCGTCAACG TGCAGCACCT CGAGTCGTTG AACGAGGACG TCGAGGCGAT CACCGGCGTC
CGGCAGAAGG AGACCGTGCC GGACCACGTC GTGCGTGCGG CCGACCAGAT CCAGCTCGTC
GACATGTCGC CGCAGGCGCT GCGCCGACGA CTGGCCCACG GGAACGTCTA CCGTGCGGAT
CAGATCGACG CGTCTCTTGC GTCGTACTTC CGCGAGGGCA ACCTCACGGC GCTGCGCGAG
CTGGCGCTGC TGTGGCTCGC GGACCGGGTC GACGACGCCC TCACGCAGTA CCGCACCGAG
CATGCGATCG CGGGGGTCTG GCCGGCGCGC GAGCGGATCG TCGTCGCGGT CACCGGCGGT
CCGGAGAGCG CGACCCTGCT GCGGCGCGGG GCGCGCATCG CGGAACGCGC CGCGGGCTCG
GAGCTGCTGG CGGTGCACGT CCTTGCCACG GACGGGCTGC CGACGGCGCC GCCGGCCGTG
ATCGCCGCGG ACCGTGCGCT CGTCGAGTCG CTGGGGGGGA CGTTCCACAC CGTGGTCGGC
GAGGACGTGC CGTCCGCGGT CGTGGACTTC GCGCAGGGCG CCAACGCGAC GATGGTCGTC
GTAGGCGTCT CGCGGCACTC GCGCTGGCGG GAGGCGCTCC TCGGGTCCAC GTCCACGGAG
ATCGCCCGGC TCGCGGGCGC GATCGACGTG CACCTGGTCA CCCACGAACG CGCCCGCTCC
GGCGCGCGCC CGCTCGCGTC CAGCGCGCTC TCGCCGAGCC GGCGGTTGGC CGGGTGGGTG
CTCGCCTTCG TGGCGCCGCT CGCGCTCACC GGGCTCCTCG TCCTCGTCCA GGAGGACGTC
AGCGCGTCCA CCGAGCTCAT GCTGTTCCTG GCGGCGGCGG TGGGCGTGGC GCTGGTGGGC
GGCCGGTGGC CCGCCGTCGC GTGCGCCGCC GCCTCGTTCC TGTGCCTGAA CTGGTTCTTC
ACGGAGCCGA CCGGCAGGTT CACGATCGCG GACCCGGAGA ACCTGCTCGC GCTCGTAGTC
TTCGTCCTCG TGGCAGCCGC CGTCGCCTCC GTCGTCGACC TCGCCGCACG GCGGGCGTCC
CAGGCGTACC GGGCGCGGGC GGAGGCCTCG ACGCTCGCCG CGCTCTCCCG GTCCGTGCTG
TCGGGCGAGG ACACGGCCGA CGCCGTCGTC TCCCGCCTCG CCGAGACGTT CCAGCTCGCG
CACGTGGCAC TCGAGGAGCG TGTGGCGGAG CGCGCACCGT GGACGACGAT CGCCGAGGCG
GCGCGGTCGA CGGCGTCGCC CGGCGGCGGC GGCTCCGGCT CCGGCTCTGA TTCCGACGAC
GACCGCACCA TCGTCCGCAT CGACGACACC CGCCGCCTCG TCCTCACCGG GCGGCCCCTC
CCCGCGGGCG ACCGGCAGGT GCTCGAGGCG TTCGGCACCC AGGCCGGCAT CGTGCTGGAG
CACCGGCGCC TCAGCGCGCG GGCCGAGAAG GCGCGGATCC TCGAGGAGGC GGACGCGACG
CGGACGGCGC TGCTCGCCGC CGTCTCCCAC GACCTGCGCA CGCCGCTCGC CTCGATCCGG
GCCGCCGTCG ACGGCCTGCG CTCCGACGCC GTCGCACTGG ATCCCGACGA CGAGGCGGCG
CTCGTCGACA CTGCCGCAAC CTCGACGGCG CGGCTCGAGC AGCTCATCGA CAACCTGCTC
GACGCGTCGC GGCTGGAGTC CGGGGCGCTG TCGCCGGTGC TTCGGGACGT GTCGCTCGAC
GAGATCGTGC CGCTCGCCGT CGACCCGTTC GCCGACCACG TGAGCCTCGA GGTGCCGGAC
GATCTCCCCC TCGTCCACAC CGATCCCGGG CTGCTGGAGC GGGTGGTCGC GAACATCGTC
GCCAACGCCG TCCGGCACGC GCCCGGCGGC GTGCCGGTGC GGGTGCTCGC CGCGAGGGCC
GGGGACTCCG TCGAGCTCCG GGTCGAGGAT CGTGGCCCCG GCCTCGACGA CGCCCGCAAG
GCCCGGATGT TCGAGCCGTT CCAGCGCCTC GGCGACGTCA GCGGCACGGG CCTCGGGCTG
GGCCTCGCCG TGGCGGCAGG GCTGTCGCGC GCAGTGGGTG CGACGATCGC CCCGGAGGAC
ACGCCGGGCG GCGGCCTGAC GATGGTGCTG ACCGTCCCCA TGGCCGGAGG GTGA
 
Protein sequence
MSDPAVDPGS APSAGAEPGR RPGRLTVYLG AAPGVGKTYA MLDEAQRRRS RGTDVVVGLV 
ETHGRAATLE KIGDLEIVPR RVVRHRGVEL TELDTEAVIA RGPEVALVDE LAHTNAPGSP
HPKRWEDVAD LLAAGIDVVT TVNVQHLESL NEDVEAITGV RQKETVPDHV VRAADQIQLV
DMSPQALRRR LAHGNVYRAD QIDASLASYF REGNLTALRE LALLWLADRV DDALTQYRTE
HAIAGVWPAR ERIVVAVTGG PESATLLRRG ARIAERAAGS ELLAVHVLAT DGLPTAPPAV
IAADRALVES LGGTFHTVVG EDVPSAVVDF AQGANATMVV VGVSRHSRWR EALLGSTSTE
IARLAGAIDV HLVTHERARS GARPLASSAL SPSRRLAGWV LAFVAPLALT GLLVLVQEDV
SASTELMLFL AAAVGVALVG GRWPAVACAA ASFLCLNWFF TEPTGRFTIA DPENLLALVV
FVLVAAAVAS VVDLAARRAS QAYRARAEAS TLAALSRSVL SGEDTADAVV SRLAETFQLA
HVALEERVAE RAPWTTIAEA ARSTASPGGG GSGSGSDSDD DRTIVRIDDT RRLVLTGRPL
PAGDRQVLEA FGTQAGIVLE HRRLSARAEK ARILEEADAT RTALLAAVSH DLRTPLASIR
AAVDGLRSDA VALDPDDEAA LVDTAATSTA RLEQLIDNLL DASRLESGAL SPVLRDVSLD
EIVPLAVDPF ADHVSLEVPD DLPLVHTDPG LLERVVANIV ANAVRHAPGG VPVRVLAARA
GDSVELRVED RGPGLDDARK ARMFEPFQRL GDVSGTGLGL GLAVAAGLSR AVGATIAPED
TPGGGLTMVL TVPMAGG