Gene Bcav_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3643 
Symbol 
ID7860985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4055600 
End bp4056385 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID643867746 
ProductHAD-superfamily hydrolase, subfamily IIA 
Protein accessionYP_002883647 
Protein GI229822121 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCCC ACCCGATCGC CGCCTGGCTC ACGGACATGG ACGGCGTGCT CGTGCACGAG 
GACCACGCGC TCCCGGGCGC CGCCGACTTC ATCGGTGCCC TGCGCGAGAC CGGCACGCCG
TTCCAGGTGC TCACGAACAA CTCGATCTTC ACGCCGCGCG ACCTGCGAGC ACGCCTGGCG
GCCACCGGGA TCGACGTGCC AGAGGACGCG ATCTGGACGT CGGCCCTCGC GACGGCGCGG
TTCCTCGCCA CCCAGGCGCC GGGCGGGAGC GCCTACGCGA TCGGGGAGGC GGGACTGACG
ACGGCGCTGT ACGAGGTCGG CTACGTCCTC ACTGCCGCGC ACCCGGACTT CGTGGTCCTC
GGCGAGACGC GCACCTACTC GTTCGAGGCG ATCACGACGG CGATCCGGCT CATCGCGGCC
GGCTCGCGCT TCATCGCGAC GAACCCGGAC ACCACCGGCC CGTCACCGCA CGGACCGCTG
CCGGCGACCG GCGCCGTCGC CGCCCTCATC ACGAAGGCGA CCGGCCGCGA GCCGTACTTC
GTCGGCAAGC CGAACCCGGT GATGATCCGG ACGGCGCTCA ACCGGATCGA CGCCCACTCG
GAGACGACGG CGATGATCGG CGACCGGATG GACACCGACG TCGTCGCCGG CATGGAGGCG
GGCCTGCGCA CGTACCTGGT GCTGAGCGGA TCCACGAACG TGACGCAGAT CGAGCGCTAC
CCCTTCCGTC CCACGCAGGT CTTCGACGGG ATCGGCGACC TCGTCAGCCT CGTGCGACGG
GACTGA
 
Protein sequence
MESHPIAAWL TDMDGVLVHE DHALPGAADF IGALRETGTP FQVLTNNSIF TPRDLRARLA 
ATGIDVPEDA IWTSALATAR FLATQAPGGS AYAIGEAGLT TALYEVGYVL TAAHPDFVVL
GETRTYSFEA ITTAIRLIAA GSRFIATNPD TTGPSPHGPL PATGAVAALI TKATGREPYF
VGKPNPVMIR TALNRIDAHS ETTAMIGDRM DTDVVAGMEA GLRTYLVLSG STNVTQIERY
PFRPTQVFDG IGDLVSLVRR D