Gene Bcav_3630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3630 
Symbol 
ID7860972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp4043871 
End bp4044482 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content73% 
IMG OID643867733 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002883634 
Protein GI229822108 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0460373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA GCGCCCGCCC CGAGCCGGCG GACGCCCCGG CGAAGCGCAC GGGACGCCGG 
CCGGGCACCC CGGACACGCG CGGCGAGATT CTCGACGCCG CACGTCAGCT TCTCGCGGAA 
CGCTCGCCCT CCGGCGTGAC CGTCCGGGCC GTAGCAGCTC GGGCCGGCGT CGACCCGGCC 
CTCGTGCACC ACTACTTCGG CACGAAGCGT TCGCTGTTCA CGGCCGCGCT CGAGCTGCCC 
TTCGACCCTC GGATGATCGT CCGCTCGATT CTCGACGGAC CGGTCGCGGA GCGCGGCGAG 
CGCATGACCC GCACGTTCTT CGGCGTGTGG GAGGACCCGT CGGGGCGCGA GCCGTTCCTG 
GCCCTCCTGC GCTCCGCGCT GAGCGCAGGG TCTGGCGCGG GACTGCTCGC CGGGTTCATC 
CAGCAGGTGA TGCTGCCGCT GGCGGAGCAC GAGGCGGGAC TCGACGGGCG GCGTGTCGAG 
CTCGCCGTCT CCCACCTCGT CGGGATCGCC GTCCTGCGCT ACCTGATCGC CGTGGAGCCG 
CTCGCCTCGA CACCGGTCGA GGAGCTCGTC GCCGCCGTCG CGCCTTCCGT GCAGCGCTAC 
CTCGCACCCT GA
 
Protein sequence
MSSSARPEPA DAPAKRTGRR PGTPDTRGEI LDAARQLLAE RSPSGVTVRA VAARAGVDPA 
LVHHYFGTKR SLFTAALELP FDPRMIVRSI LDGPVAERGE RMTRTFFGVW EDPSGREPFL 
ALLRSALSAG SGAGLLAGFI QQVMLPLAEH EAGLDGRRVE LAVSHLVGIA VLRYLIAVEP 
LASTPVEELV AAVAPSVQRY LAP