| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3623 |
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| Symbol | |
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| ID | 7860965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 4032376 |
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| End bp | 4033704 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643867726 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002883627 |
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| Protein GI | 229822101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00170169 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0768086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGAA CACGACGTGG GGCACTCGGA GCGCTCGTGG CGGTAGCCGG CGGAGCCCTC
GTGCTCGCCG GCTGCAGCAG CGGGGGCGGC GGGGGCGGCG GTGGCGAGGG CGAGGACGAG
GCCGTCTCGA TCACCGTCCT CGTGGGCAAC ACGGAGACGG ACCTCCTCGT CAACGAGGCG
CTCGTCGAGG CGTTCACCGC GGAGCATCCG AACATCGAGG TCGAGCTCGA GACCCGCCCG
GGCGGCACGG AGGGCGACAA CATCGTCAAG ACGCGCCTCT CGACCGGCGA CATGCCGGAC
GCGTTCGTCT ACAACTCGGG CTCGTTGTTC CAGGCGATCA ACCCCGTCCA GAACCTCGTC
GACCTGAGCG ACGAGCCGTT CGTGGACAAC GTCGACGAGT CGTTCTGGCC GGTCGTCTCC
GTCGACGACA CCATCTACGG TGCGCCGGCG GGCGTGCTCT CGTCGGGCGG GATCATGTAC
AGCATCCCGA TCTACGAGGA GCTGGGACTC GAGGTCCCGA CCACGTGGGA CGCGTTCATG
GAGAACAACG ACGCGATCGC CGAGGCCGGC TACACGCCCG TCATCCAGAG CTATCAGGAG
ACGTGGACGT CGCAGGTGCT CATGCTCGGC GACTTCCACA ACGTGGCCGC CGAGTACCCG
GACTTCGCCG AGGAGTACAC GGCCAACGAG ACGTCGTACG GCACGAACCC GGCGGGACTG
CGCAGCTTCG AGAAGCTCCA GGAGGTCCAC GACGCCGGCT ACCTGAACGA GGACTTCGCC
TCCGCGACGT TCAACGACGG TCTCGCGATG CTCGCCACCG GCGAGGGGGC GCACTACCCG
ATGCTCACCG GAGCCCTGGC GAACATCAAG GCCAACCACC CCGAGAACGT GGACGACGTC
GGCTTCTTCG CCATCCCCGG CGAGGACGCC GAGACCAACG GGGCGACCGT CTGGCTCCCG
GCGGGCTGGT ACATCCCGAC GACGACGGAG GGCGCCCAGC TCGAGGCCGC GAAGGAGTGG
GTCAACTTCA TCGCGAGCGC GGCCGGCGCG ACGGCGGAGG TCGAGGCGGT CGGAGCGAAC
GGGCCGTACC TGCTCAACGA CTACACGCTC CCGGACGACG TCCCGCGGAT GGTGCAGGAC
CTCCAGGTGT ACGTGGACGA GGGCGCCATG ACCCCGGCCC TCGAGTTCCT CTCCCCGATC
AAGGGCCCGT CGCTCGAGCA GATCACCGTC GAGATCGGGT CGGGGATCCG CAGCGCGGCC
GACGGGGCCG CCCTGTACGA CGAGGACGTG GAGAAGCAGG CCCAACAGCT GGGGCTCGAA
GGCTGGTGA
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| Protein sequence | MRRTRRGALG ALVAVAGGAL VLAGCSSGGG GGGGGEGEDE AVSITVLVGN TETDLLVNEA
LVEAFTAEHP NIEVELETRP GGTEGDNIVK TRLSTGDMPD AFVYNSGSLF QAINPVQNLV
DLSDEPFVDN VDESFWPVVS VDDTIYGAPA GVLSSGGIMY SIPIYEELGL EVPTTWDAFM
ENNDAIAEAG YTPVIQSYQE TWTSQVLMLG DFHNVAAEYP DFAEEYTANE TSYGTNPAGL
RSFEKLQEVH DAGYLNEDFA SATFNDGLAM LATGEGAHYP MLTGALANIK ANHPENVDDV
GFFAIPGEDA ETNGATVWLP AGWYIPTTTE GAQLEAAKEW VNFIASAAGA TAEVEAVGAN
GPYLLNDYTL PDDVPRMVQD LQVYVDEGAM TPALEFLSPI KGPSLEQITV EIGSGIRSAA
DGAALYDEDV EKQAQQLGLE GW
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