Gene Bcav_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3614 
Symbol 
ID7860956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4017836 
End bp4018699 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID643867717 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002883618 
Protein GI229822092 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.484603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.727796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGA TCCGACACCA GTACAGCTAC TGGTTCGCGG CCCCCGGGAT CGCGCTCTAC 
CTGTTCTTCT TCGTCGTCCC GTCCCTCACG TCGTTCTTCT TCTCGCTGAC GCGGTGGAGC
CTGACGGAGT GGACCTTCAT CGGGCTGGAC AACTTTCGCG CCTTCCTCGA CGAACCGTTC
CTCAGCAAGG CGATCGCCAA CACGTTCGTC TACGCGCTCG CCACCATGGT CCCGAAGGTG
CTGATCGGGC TGCCGTTGGC CGCGTTCCTC GTGTCCGGCT TCCGCGCCGC CGGGTTCGTC
CGCTCGGTGA TCTTCTTCCC GACCCTCGTG TCGACGGTGG GGATCGGCAT CACGTTCCGG
GTGCTGATGA ACCCCACGTA CGGCCTCATC GACCAGGCGC TCGGCGCCGT CGGCATCCGG
GGTCCCGAGT GGCTGAGCGA TCCCGACCTC GCCCTGCTGT CCGTGGCGGC GGTCGACGTC
TGGTCCGGGA TCGGGATCGC GACGCTGATC TTCGTGTCCG GCGTGGTGTC GATCCCCCAG
CAGTACTTCG AGGCCGCGAC CGTCGACGGC GCCGGGGCGC TCCGGCGGTT CTTCGCGATC
ACCGTGCCGC TCACCCGCCC GGCCACGGCG ACTGTCGTGA TCCTCGCGCT CATCGGGGGG
CTGCGGGCGT TCGACCTCAT CTGGGTGATG ACCGGAGGAG GGCCCGGGTT CGCGTCCGAC
GTCCTCGGCT CGGTGATCTT CAAGCAGTAC ACGGCGGGGT TCTACGGGCT GTCGACCGCC
GGCAACGTGA TCATGTTCGT GATCGTGGCG GCGATCGCCT ACCCGGTCTC CCGGCTCCTG
ACCCGGCGGG AGGTCGACCT GTGA
 
Protein sequence
MVRIRHQYSY WFAAPGIALY LFFFVVPSLT SFFFSLTRWS LTEWTFIGLD NFRAFLDEPF 
LSKAIANTFV YALATMVPKV LIGLPLAAFL VSGFRAAGFV RSVIFFPTLV STVGIGITFR
VLMNPTYGLI DQALGAVGIR GPEWLSDPDL ALLSVAAVDV WSGIGIATLI FVSGVVSIPQ
QYFEAATVDG AGALRRFFAI TVPLTRPATA TVVILALIGG LRAFDLIWVM TGGGPGFASD
VLGSVIFKQY TAGFYGLSTA GNVIMFVIVA AIAYPVSRLL TRREVDL