Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3614 |
Symbol | |
ID | 7860956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4017836 |
End bp | 4018699 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643867717 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002883618 |
Protein GI | 229822092 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.484603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.727796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAGGA TCCGACACCA GTACAGCTAC TGGTTCGCGG CCCCCGGGAT CGCGCTCTAC CTGTTCTTCT TCGTCGTCCC GTCCCTCACG TCGTTCTTCT TCTCGCTGAC GCGGTGGAGC CTGACGGAGT GGACCTTCAT CGGGCTGGAC AACTTTCGCG CCTTCCTCGA CGAACCGTTC CTCAGCAAGG CGATCGCCAA CACGTTCGTC TACGCGCTCG CCACCATGGT CCCGAAGGTG CTGATCGGGC TGCCGTTGGC CGCGTTCCTC GTGTCCGGCT TCCGCGCCGC CGGGTTCGTC CGCTCGGTGA TCTTCTTCCC GACCCTCGTG TCGACGGTGG GGATCGGCAT CACGTTCCGG GTGCTGATGA ACCCCACGTA CGGCCTCATC GACCAGGCGC TCGGCGCCGT CGGCATCCGG GGTCCCGAGT GGCTGAGCGA TCCCGACCTC GCCCTGCTGT CCGTGGCGGC GGTCGACGTC TGGTCCGGGA TCGGGATCGC GACGCTGATC TTCGTGTCCG GCGTGGTGTC GATCCCCCAG CAGTACTTCG AGGCCGCGAC CGTCGACGGC GCCGGGGCGC TCCGGCGGTT CTTCGCGATC ACCGTGCCGC TCACCCGCCC GGCCACGGCG ACTGTCGTGA TCCTCGCGCT CATCGGGGGG CTGCGGGCGT TCGACCTCAT CTGGGTGATG ACCGGAGGAG GGCCCGGGTT CGCGTCCGAC GTCCTCGGCT CGGTGATCTT CAAGCAGTAC ACGGCGGGGT TCTACGGGCT GTCGACCGCC GGCAACGTGA TCATGTTCGT GATCGTGGCG GCGATCGCCT ACCCGGTCTC CCGGCTCCTG ACCCGGCGGG AGGTCGACCT GTGA
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Protein sequence | MVRIRHQYSY WFAAPGIALY LFFFVVPSLT SFFFSLTRWS LTEWTFIGLD NFRAFLDEPF LSKAIANTFV YALATMVPKV LIGLPLAAFL VSGFRAAGFV RSVIFFPTLV STVGIGITFR VLMNPTYGLI DQALGAVGIR GPEWLSDPDL ALLSVAAVDV WSGIGIATLI FVSGVVSIPQ QYFEAATVDG AGALRRFFAI TVPLTRPATA TVVILALIGG LRAFDLIWVM TGGGPGFASD VLGSVIFKQY TAGFYGLSTA GNVIMFVIVA AIAYPVSRLL TRREVDL
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