| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3565 |
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| Symbol | sdhA |
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| ID | 7860829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3959644 |
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| End bp | 3961578 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643867668 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002883569 |
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| Protein GI | 229822043 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.606678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGAGA CCGAACGACA CGACTACGAC GTCCTCGTCA TCGGGGCTGG TGGTGCGGGC
CTGCGGGCCG CGATCGAGGC ACGCCAGCGT GGCCTGCGGA CGGCCGTCAT CTGCAAGTCC
CTGTTCGGCA AGGCGCACAC CGTCATGGCG GAGGGCGGCT GCGCGGCGGC GATGGGGAAC
GTCAACTCGA ACGACAGCTG GCAGGTGCAC TTCCGCGACA CGATGCGCGG CGGGAAGTTC
CTCAACAACT GGCGCATGGC GGAGCTGCAC GCGAAGGAGG CACCCGAGCG CGTCTGGGAG
CTCGAGACGT ACGGGGCGCT GTTCGACCGC ACGGCCGACG GCCGGATCAG TCAGCGCAAC
TTCGGCGGGC ACACGTACCC GCGGCTCGCG CACGTCGGCG ACCGCACCGG CCTCGAGCTC
ATCCGCACGA TGCAGCAGAA GATCGTGTCG CTGCAGCAGG AGGACTACGC GGCCACCGGC
GACTACGAGG CGCGGCTGCG CGTGTTCGCG GAGTGCACCA TCACCGAGCT GCTCACCGGC
GACGACGGCG CGATCGCCGG GGCGTTCGGG TACTGGCGGG AGTCCGGCCG ATTCGTCGTG
TTCTCCGCGC CGGCCGTGGT GCTCGCGACG GGCGGCATCG GGAAGTCGTT CAAGGTGACG
TCGAACTCGT GGGAGTACAC GGGCGACGGG CACGCCCTGG CGATGCGCGC CGGAGCCGGG
CTCATCGACA TGGAGTTCGT GCAGTTCCAC CCCACGGGCA TGGTGTGGCC GCCGAGCGTG
AAGGGGATCC TCGTCACCGA AGGCGTGCGC GGCGACGGCG GCGTGCTCAA GAACTCTGCC
GGCGAGCGGT TCATGTTCAA CTACGTCCCG GACGTGTTCA AGGGTCAGTA CGCGGAGACC
GTGGAGGAGG CGGACGCCTG GTACACCGAC CAGGAGAACA ACCGCCGGAC GCCGGACCTC
CTGCCGCGCG ACGAGGTGGC ACGGGCGATC AACACCGAGG TCAAGGAGGG TCGCGGCTCG
CCGCACGGCG GCGTGTTCCT CGACATCGCG AGCCGGATGC CGGCGGACGA GATCCAGCGC
CGGCTGCCGT CGATGTACCA CCAGTTCAAG GAGCTGGCCG ACGTCGACAT CACCGCCGAG
CCCATGGAGG TCGGCCCCAC GTGCCACTAC GTCATGGGCG GCATCGAGGT GGACCCGGAC
ACGGGGTCCT CGAGCGTGCC CGGGCTGTTC GCGGCAGGGG AGTGCTCCGG CGGGATGCAC
GGCTCGAACC GGCTGGGCGG CAACTCGCTC TCGGACCTGC TCGTGTTCGG GCGGCGTGCC
GGGCTCGGCG CCGCCGACTA CGTCTCCGGC CTCGAGTCAC GTCCGGCCGT GCGCGCCGCC
GCCGTCGACG ACGCCGCGGC CATGGCCGTC GCGCCCTTCG ACCCCGCGGC CGACGGGGGT
TCCGGGGAGA ACCCGTACAC GCTGCACGCC GAGCTGCAGA CGGCGATGAA CGACCTCGTC
GGCATCATCC GGACCGAGGC CGAGATGCAG GCGGCGCTGG AGCGGCTCGG CGAGCTGCGG
GAGCGCGTGC GCGGCGTCGT CGTCGAGGGA CACCGGCAGT ACAACCCGGG ATGGCACCTG
GCGCTCGACC TGCGGAACAT GCTCATGGTG GGGGAGGCGG TCGCGTCGTC GGCCCTGCTG
CGCACGGAGA GCCGCGGCGG CCACACGCGA GAGGACCACC CGGGGATGGA CGCGCAGTGG
CGGCACCGGG TGCTCGTCAC GCGGTGCGCC GACCACGGCG GCGGCGACCC GGTGGTGCCG
CGCGTCGTCG TCGAGCCGGA GGAGCGGGCG CCGATGCGCG ACGACCTGCT CGCGCTCTTC
GACCTCACCG AGCTCGAGAA GTACTACACC GGGGGCGAGC TGGCCTCGCA CCCGGAGCAG
GGAGCGAGCG CATGA
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| Protein sequence | MTETERHDYD VLVIGAGGAG LRAAIEARQR GLRTAVICKS LFGKAHTVMA EGGCAAAMGN
VNSNDSWQVH FRDTMRGGKF LNNWRMAELH AKEAPERVWE LETYGALFDR TADGRISQRN
FGGHTYPRLA HVGDRTGLEL IRTMQQKIVS LQQEDYAATG DYEARLRVFA ECTITELLTG
DDGAIAGAFG YWRESGRFVV FSAPAVVLAT GGIGKSFKVT SNSWEYTGDG HALAMRAGAG
LIDMEFVQFH PTGMVWPPSV KGILVTEGVR GDGGVLKNSA GERFMFNYVP DVFKGQYAET
VEEADAWYTD QENNRRTPDL LPRDEVARAI NTEVKEGRGS PHGGVFLDIA SRMPADEIQR
RLPSMYHQFK ELADVDITAE PMEVGPTCHY VMGGIEVDPD TGSSSVPGLF AAGECSGGMH
GSNRLGGNSL SDLLVFGRRA GLGAADYVSG LESRPAVRAA AVDDAAAMAV APFDPAADGG
SGENPYTLHA ELQTAMNDLV GIIRTEAEMQ AALERLGELR ERVRGVVVEG HRQYNPGWHL
ALDLRNMLMV GEAVASSALL RTESRGGHTR EDHPGMDAQW RHRVLVTRCA DHGGGDPVVP
RVVVEPEERA PMRDDLLALF DLTELEKYYT GGELASHPEQ GASA
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