Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3559 |
Symbol | |
ID | 7860823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3953345 |
End bp | 3954043 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643867662 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002883563 |
Protein GI | 229822037 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.925316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGTC AGGTACGGTT GTCAGACAAC AAAGGGGTCC TCATGGAGGT ACAGCAGGTC CGCGGCGTCT CCCTCGTCGA TGCGGCGTAC GCCGCGCTCC GCGCGGAGAT CCTGGCGGCC CGAATCCCCC CGGGCGAGCC GCTGACGGAA CAGGGCCTCG CGACGCGGTT CGACATCGCC CGCCCCACCG CCAAGGCCGC CGTCGAGCGC CTGGTCACGG AAGGGCTGCT CGTCCGGACG ATGCACCGCA GTGCCCACGT GCCCGTGCTC AACGCCGCGG ACATCCAGGA CGTCTTCGCA TTGCGGGAGC TCCTGGAGCG CGTCGCCGTC GTCGCCCTGG CGTCCGGCAA GTCCGTCCCG ACGGACGCCG AGCGTGCGCT TGCGGAGATG GAGGCGGCTG ACGCCACCGG CGACGTCGCG CGCCTCGTGG AGGCCGACGT CGCCTTCCAC CGGGCGCTCG TCTCGGCCTC GGGCAGCCTG CGGCGCGATC GCGCCCACCA GCAGGTCATG GGCGAGGCAC AGCTCGCGAT CATCCAGGAC CAGGTGCTGC TCCTGGAGCA GGCGGTGGGC GTAGCCGCCG AGCACCGCGC GATCCTCACG GCGATCGCGG GCGGCGACGC GGAGGCGGCC GAGCGCCTCG TGGCCGAGCA CCTCGGTTCG GTGTCGCGCC GGGTCAGCAA CGGCGCCGCG ACTGACTGA
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Protein sequence | MVSQVRLSDN KGVLMEVQQV RGVSLVDAAY AALRAEILAA RIPPGEPLTE QGLATRFDIA RPTAKAAVER LVTEGLLVRT MHRSAHVPVL NAADIQDVFA LRELLERVAV VALASGKSVP TDAERALAEM EAADATGDVA RLVEADVAFH RALVSASGSL RRDRAHQQVM GEAQLAIIQD QVLLLEQAVG VAAEHRAILT AIAGGDAEAA ERLVAEHLGS VSRRVSNGAA TD
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