Gene Bcav_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3559 
Symbol 
ID7860823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3953345 
End bp3954043 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content73% 
IMG OID643867662 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002883563 
Protein GI229822037 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.925316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGTC AGGTACGGTT GTCAGACAAC AAAGGGGTCC TCATGGAGGT ACAGCAGGTC 
CGCGGCGTCT CCCTCGTCGA TGCGGCGTAC GCCGCGCTCC GCGCGGAGAT CCTGGCGGCC
CGAATCCCCC CGGGCGAGCC GCTGACGGAA CAGGGCCTCG CGACGCGGTT CGACATCGCC
CGCCCCACCG CCAAGGCCGC CGTCGAGCGC CTGGTCACGG AAGGGCTGCT CGTCCGGACG
ATGCACCGCA GTGCCCACGT GCCCGTGCTC AACGCCGCGG ACATCCAGGA CGTCTTCGCA
TTGCGGGAGC TCCTGGAGCG CGTCGCCGTC GTCGCCCTGG CGTCCGGCAA GTCCGTCCCG
ACGGACGCCG AGCGTGCGCT TGCGGAGATG GAGGCGGCTG ACGCCACCGG CGACGTCGCG
CGCCTCGTGG AGGCCGACGT CGCCTTCCAC CGGGCGCTCG TCTCGGCCTC GGGCAGCCTG
CGGCGCGATC GCGCCCACCA GCAGGTCATG GGCGAGGCAC AGCTCGCGAT CATCCAGGAC
CAGGTGCTGC TCCTGGAGCA GGCGGTGGGC GTAGCCGCCG AGCACCGCGC GATCCTCACG
GCGATCGCGG GCGGCGACGC GGAGGCGGCC GAGCGCCTCG TGGCCGAGCA CCTCGGTTCG
GTGTCGCGCC GGGTCAGCAA CGGCGCCGCG ACTGACTGA
 
Protein sequence
MVSQVRLSDN KGVLMEVQQV RGVSLVDAAY AALRAEILAA RIPPGEPLTE QGLATRFDIA 
RPTAKAAVER LVTEGLLVRT MHRSAHVPVL NAADIQDVFA LRELLERVAV VALASGKSVP
TDAERALAEM EAADATGDVA RLVEADVAFH RALVSASGSL RRDRAHQQVM GEAQLAIIQD
QVLLLEQAVG VAAEHRAILT AIAGGDAEAA ERLVAEHLGS VSRRVSNGAA TD