Gene Bcav_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3542 
Symbol 
ID7860806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3935802 
End bp3937097 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content74% 
IMG OID643867645 
Producthistidine kinase 
Protein accessionYP_002883546 
Protein GI229822020 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.787824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCG ACGTCGAGCC GGACGCCCAG ACCGAGCGGC GGGCGCAGGC GATCGTCACA 
GCGCTCCCGT ACGTCCTGCT GGCGGTCAGC ACAGTCGTCA CGCTGGTGCA GGACGACCTC
ACCGTGCCGG TGGCACCCGT GCTCGCCCTC ACCGCCGCGA CGGTCGCCTG GGTCGCCGGG
TTCCAGGTCC GGATCCGGGC ATCCGGCGGC GGCTCGCCCG CTCCGCTCGC CGCGGTGTAC
TACGCGGGTC TCATGATCGC GGCCGGCGGG CTGGTGTGGT TGGCGCCCTG GTACGGGATC
TTCGCCTTCG TCGGGTATGT GCACGCGTAC GAGCACCTGG TGGGCGGTTG GCGCCATGTC
GGCGCAGCGG TGACGTCGGC GATCATGGCC GTCGTCTACC TGGGCGGGTT CGCGGAGATC
GACGGCGACT GGTGGCTGTG GGGCGCGATC GTGGTGGTCA GCTCGGTGCT GGCGAGCCTG
TGCTTCGAGT TCCTCGACGT GAGCGACCGG CACGCCGCGG AGCAGCGGCA GGCTCTCGCC
GAGGTGCACG AGGCCAACGC GAGGCTCGAA GCGGCACTGG AGGAGAACGC CGGCCTGCAC
GCGCAGCTCC TGGTGCAGGC GCGCGAGGCC GGGGTGCTGG ACGAGCGGCA GCGGATGGCG
CGCGAGATCC ACGACACCCT GGCCCAGGGA CTCGCCGGCA TCCTCACGCA GCTCCAGGCG
GCGGAGCAGG CGGCGCACGA GCCCGAGGCG TGGGGCCGGC ACGTGACGAA CGCGACCGAC
CTGGCCCGCG AGAGCCTCGC CGAGGCCCGG CGGACCGTCC ACGCCGTCGA GCCCGAGGCC
CTGGCGGATG CGCGTCTTCC GGAGGCGATC GGTGACGTGG CCAGGCGCTG GTCCGAGGTG
AACGACGTCC GCGCGGACCT GACGACGACC GGCGACCCCC GCCCGATGCA CGTGGACGTC
GAGGTGACGC TGCTGCGGGC CGCGCAGGAG GCGCTCGCGA ACGTCGCGAA GCACGCCCGG
GCGAGCCGCG TCGGCCTGAC GCTGTCCTAC ATGGAGGATC TGGTGACGCT GGACGTGCGG
GACGACGGCG TGGGCTTCGA GCCCGATGCG ACGCGGGGCC AGGGCCACGC GGACGGCGGG
TTCGGGCTCG CGGGGATGCG CCAGCGCGTC CAGCGGCTCG CGGGCCGGCT GGACGTCGAG
TCGGAGCCCG GCGGCGGGAC GGCGATCTCC GCGTCGGTGC CGGCGATCCC GGCGACCCCG
GCGGTCCCCG CGGGCCCGGC GGGAGGTCCG CAGTGA
 
Protein sequence
MSVDVEPDAQ TERRAQAIVT ALPYVLLAVS TVVTLVQDDL TVPVAPVLAL TAATVAWVAG 
FQVRIRASGG GSPAPLAAVY YAGLMIAAGG LVWLAPWYGI FAFVGYVHAY EHLVGGWRHV
GAAVTSAIMA VVYLGGFAEI DGDWWLWGAI VVVSSVLASL CFEFLDVSDR HAAEQRQALA
EVHEANARLE AALEENAGLH AQLLVQAREA GVLDERQRMA REIHDTLAQG LAGILTQLQA
AEQAAHEPEA WGRHVTNATD LARESLAEAR RTVHAVEPEA LADARLPEAI GDVARRWSEV
NDVRADLTTT GDPRPMHVDV EVTLLRAAQE ALANVAKHAR ASRVGLTLSY MEDLVTLDVR
DDGVGFEPDA TRGQGHADGG FGLAGMRQRV QRLAGRLDVE SEPGGGTAIS ASVPAIPATP
AVPAGPAGGP Q