Gene Bcav_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3535 
Symbol 
ID7860799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3929560 
End bp3930174 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID643867638 
Productprotein of unknown function UPF0157 
Protein accessionYP_002883539 
Protein GI229822013 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.532871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.357323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCCTC ACGTCCCGAA CGCCGAGCTG ACCCGACACC ACGACAGCCC CGGGGACGAC 
AGGATGTGGG TGCACGGCCG ACCCGAGCCG ACACCGATCA CCGTCGTGGA CTACGACGAG
AGCTGGCCCG CACAGTTCGA CCGCGTGGCG GCGCGCGTGA GGGCGGCTCT GGGGCGGCGG
GCGCTCGCCG TGGAGCACGT CGGCTCCACC TCGGTCCCGG GACTGCCGGC GAAGCCGATC
ATCGACGTCG CGCTCACCGT CGCGGACCCG GCGGACGAGG CGGCGTACGT CCCGGACCTG
GCTGCGGCAG GCTTCGTGCT GGTGATCCGC GAGCCCGGCT GGCACGAGCA CCGTGCGCTC
AAGCTCGCCG ACCCGAACAC GAACCTGCAC GTGTGGGGCC CGGACTGCCC GGAGGTCGCA
CGGCAGCTGA TGTTCCGTCA GTGGCTCATC GACCACCCCG AGGATCTGGC GCGGTACCGC
GACGCGAAGC TGGCCGCGGC GGCCGCCACG AACGCCGTTG GCGAGATCGT CACCGCCTAC
AACCGTCACA AGGAACCGGT GATCCGCGAC ATCTACGACC GGATGTTCCG GGAGCACGGA
CTGCTCGAGG GATAG
 
Protein sequence
MGPHVPNAEL TRHHDSPGDD RMWVHGRPEP TPITVVDYDE SWPAQFDRVA ARVRAALGRR 
ALAVEHVGST SVPGLPAKPI IDVALTVADP ADEAAYVPDL AAAGFVLVIR EPGWHEHRAL
KLADPNTNLH VWGPDCPEVA RQLMFRQWLI DHPEDLARYR DAKLAAAAAT NAVGEIVTAY
NRHKEPVIRD IYDRMFREHG LLEG