| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3517 |
|---|
| Symbol | |
|---|
| ID | 7858412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3909268 |
|---|
| End bp | 3911160 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643867620 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_002883521 |
|---|
| Protein GI | 229821995 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.761621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAACC TGACCGTCAT CCAGACGTCG CCGGATCCTG AGCAGCAGGT CCCGGGACAG
CGCGCTCGCC CGTCGATCGC CGATCGCATC GGCGGGATCG GGCAGAACCG CCTCAGCGCG
CTCCTCCTGG TGCTCGCGAC GCTCGTCGCG ATCGTGTGGG CGAACGTGGC GCAGGACTCG
TACTCCTCGT TCTGGGAGAC GCACCTCACG CTCGGGGTGG GCAACGATCT CGAGCTGGAC
TTCACGCTGC ACGCGCTCGT CAACGACGCC CTCATGGCGA TCTTCTTCTT CACGGTGGGA
CTCGAGGTCC GCCGGGAGTT CGCCATCGGC GAGCTGACCA GCTGGTCGCG GGCGGTGGTC
CCGGTCGTGA CGGCGATCGC CGGTCTCGCG GTGCCCGCGG CGCTCTATGT CCTGCTCACC
TCCGGCACCG ACTACTCCGG CGCGTGGGGC ATCGTGATCT CCACGGACAC CGCGTTCCTC
GTCGGTGCGC TCGCTCTCAT CGGGCCACGC GCCTCCGGCC GGCTCCGCGT CTTCCTGCTC
GCGCTCGCCG TGGTCGACGA CGTCGGCGCG CTCAGCATCA TCGCCCTCGT CTACACCGAG
GACTTCAACC CTCTCCCGCT CGTGATCGCC GCCGTCGGGC TGCTCGGCGT CTACCTCACG
CGGTACCTCA ACAGCGGACG CGGTCCGGTC TACGCCACCC TCGCGATCAT CGTGTGGCTG
GCGTTCCTCG CGTCCGGCGT CCACCCGACG CTCGCCGGCG TCGCCATCGC CCTGCTCGTC
CCCGTCTACC GACCCACGCG GCGCGACGTC GACCATGCGC TGGATCTCGC GCGCACGTTC
CGGCAGTCGC CGAACAGCGA GTACGCGAGG GCCGCCGCGA ACAGCCTGCG CGAGTCGATC
TCGATCAACG AGCGCCTCCA GTCCGCGTAC TCCCCGTACG TCGCCTTCGT GATCCTTCCG
CTGTTCGCGC TCGCGAACGC AGGCGTCCTG CTCGACGCCG AGATCCTCGC CGCCGCTGCG
CGCTCGCCGA TCACCTGGGG CATCGTCGTC GGGCTCGTGG CCGGGAAGTT CGTCGGGATC
TTCGGGGCGT CGGCGTTCAT GAAGACGTTC CGGCTCGGCG ACTTCGGTGC CGGCCTCACC
CTCGACCGCA TCGCCGGCGG CGCCGCGCTC TGCGGCATCG GCTTCACCAT CTCGCTGTTC
ATCGTCGAGC TCGCCATCGA CGACCCTGCG GTACAGAACG AGGCGCGCGT CGGCGTCCTG
TCGGGCTCCG TCCTCGCCTT CGTGATCGCG ACGGTGATCT TCCGGGTCTC CGACCGGATC
CGGCCGCCCG GGGAGTCGGC CCGAAGGCTG GCGCGCCCCA TCGATCCCGA GCGCGACCAC
ATCTTCGGCG CCCTCGACGC ACCGTTCACG ATCGTGGAGT ACGGCGACTT CCAGTGCGGC
TTCTGCCTCA AGGCCTCCGG TTCCATCCAG GAGGTGCACC GCGAGCTGGG TGACCGCCTG
CGGTACGTCT GGCGGCACGC GCCGCTCACC CGCTACCACC CGAACGCGCT CGCGGCGGCC
GAGGCCTCGG AGGCCGCGGC GCGGCAGGGC AAGTTCTTCG AGTTCGAGCG GAGCCTGTTC
GCGGACCAGG AGCACCAGCT GCCGGTGGAC ATCATCCGCC GCGCCGAGGA GCTCGGGCTC
GACGTCGAGC AGTTCGAGGC GGACCTGACC TCGCCCGAGG TCACGGCGCG CGTCCAGGAC
GACATGCTCG ACGCCGAGGC GATGGACATC ACCGCCGTCC CCACCCTGTT CGTCAACGGG
CGGCTGCACG TCGGGCCGTA CGACGCGCAG TCGCTGATCA GGGAGCTCAT GGAGACGGCG
CCGTCGGCCG ACGCGCGGCG GTCGGAGGGC TAG
|
|---|
| Protein sequence | MSNLTVIQTS PDPEQQVPGQ RARPSIADRI GGIGQNRLSA LLLVLATLVA IVWANVAQDS
YSSFWETHLT LGVGNDLELD FTLHALVNDA LMAIFFFTVG LEVRREFAIG ELTSWSRAVV
PVVTAIAGLA VPAALYVLLT SGTDYSGAWG IVISTDTAFL VGALALIGPR ASGRLRVFLL
ALAVVDDVGA LSIIALVYTE DFNPLPLVIA AVGLLGVYLT RYLNSGRGPV YATLAIIVWL
AFLASGVHPT LAGVAIALLV PVYRPTRRDV DHALDLARTF RQSPNSEYAR AAANSLRESI
SINERLQSAY SPYVAFVILP LFALANAGVL LDAEILAAAA RSPITWGIVV GLVAGKFVGI
FGASAFMKTF RLGDFGAGLT LDRIAGGAAL CGIGFTISLF IVELAIDDPA VQNEARVGVL
SGSVLAFVIA TVIFRVSDRI RPPGESARRL ARPIDPERDH IFGALDAPFT IVEYGDFQCG
FCLKASGSIQ EVHRELGDRL RYVWRHAPLT RYHPNALAAA EASEAAARQG KFFEFERSLF
ADQEHQLPVD IIRRAEELGL DVEQFEADLT SPEVTARVQD DMLDAEAMDI TAVPTLFVNG
RLHVGPYDAQ SLIRELMETA PSADARRSEG
|
|---|
| |