Gene Bcav_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3496 
Symbol 
ID7858388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3890155 
End bp3891057 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content74% 
IMG OID643867596 
Productcation diffusion facilitator family transporter 
Protein accessionYP_002883500 
Protein GI229821974 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.844675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCACT CGCACGCGCC GACGGCGTCC GGGCGGCATC GCGGGCGGCT GGCCGCAGCC 
CTCGCGATCA CCGTCACGGT CATGGTCGTC GAAGTCATCG GGGCGTGGCT CACCGGATCG
CTCGCGCTCC TCGCCGACGC CGGGCACATG CTCTCCGACG CCACCGGCCT CACGCTCGCG
CTCATCGCGA CGTGGCTCGC CGCGCGGCCG ACGTCGCACC GCTGGACGTT CGGCTGGCAG
CGCGCCGAGG TGCTCGCCGC CCTGGCGAAC GGGGTGATCC TCGCCGTCGT CGCCGTCACC
GTGCTCATCG AGGGGTTGCG GCGGTTCTCC ACGCCGGGCG AGGTCGAGGC ACCGGTGATG
CTCGCCGTCG GCGCGCTCGG ACTCGTGGCG AACCTGGTCG CGCTGCGGCT CCTCGCCGCC
GGGCAGAAGG AGAGCCTCAA CGTGCGCGGC GCCTACCTCG AGGTGCTCGG CGATCTCCTC
GGGTCCGTGG CGGTCATCGC CGCCGCGCTC GTGATCGCCA CCACCGGGTG GGTGCAGGCC
GACGCCGTCG CCTCGATCGC GATCGCCGTG CTCATCGCGC CCCGCGCGTT CTCCCTGCTG
CGCGACGTCG CCCGCGTGCT GCTCGAGGGC ACGCCCAAGG AGATGGAGCT CGACACCGTG
CGGCGCCACC TCGCCGGCGT GCCCGGCGTC GTCGCCGTGC ACGACCTGCA CGCGTGGACG
ATCACCTCGG GCGTGCCGGT GCTCAGCGCA CACGTCGTCG TCGACGACGA CGTGCTCGAC
CCGGCGCGGT TCTGCGGCGT GCTCGACGAG CTGCAGCACT GCTTGCGCGG CCACTTCGAC
GTCGAGCACT CCACCCTGCA GCTCGAACCG GCCACGCACA CCGAGCGCGG CGTCCACGCC
TGA
 
Protein sequence
MGHSHAPTAS GRHRGRLAAA LAITVTVMVV EVIGAWLTGS LALLADAGHM LSDATGLTLA 
LIATWLAARP TSHRWTFGWQ RAEVLAALAN GVILAVVAVT VLIEGLRRFS TPGEVEAPVM
LAVGALGLVA NLVALRLLAA GQKESLNVRG AYLEVLGDLL GSVAVIAAAL VIATTGWVQA
DAVASIAIAV LIAPRAFSLL RDVARVLLEG TPKEMELDTV RRHLAGVPGV VAVHDLHAWT
ITSGVPVLSA HVVVDDDVLD PARFCGVLDE LQHCLRGHFD VEHSTLQLEP ATHTERGVHA