Gene Bcav_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3438 
Symbol 
ID7859211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3836628 
End bp3837533 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content75% 
IMG OID643867537 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002883442 
Protein GI229821916 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGG TGACGCCGTC CGACACCGCG CTCGGCACGG CCACCGCCAC GAGTGACGTC 
GCCACGGCCG TGGCGCTGAG CGTGCCCCAC GGGGCGGATC CCGGCCGCCC GCACGGGCGC
GCGACGACGC GGCGCTCGCG CTGGTGGCGC ACCGCCGTCG GCCTGATCGT GCCGCTGCTC
CTGCTCGCCG CCTGGCAGCT CGTGACGGCC ACCGGCGTCG TCCCGGCCTA CCAGCTGCCC
TCGCCGGGCT CGGTGTGGGA TGCCGCCGTC GACCTCGCGC AGCGCGGTGT GCTCGGTCAG
TACGTGGCGA TCTCCACCCA GCGCGTGCTC ATCGGGTTCG CCATCGGCGG CCTCCTCGGC
CTCGCCGTCG GATCCGTGGT GGGCCTCTCG CGTCTCAGCG CCGCTCTCTT CGCGCCCACG
CTCGCCGGGG CGCGCGCCGT CCCGTCGCTC GCCTGGGTGC CGCTGCTCGT GCTGTGGATC
GGCATCAACG AGGACTCCAA GGTGATCCTC ATCGCCATCG GGGCGTTCTT CCCCGTGTAC
ACGACGGTGG CCGGCGCGCT GCGCCACGTC GACCCGCACC TCGTCGAGGC CGGCCGCGCG
TACGGCCTGT GCGGCCCCCG CCTGCTCGCG CGCGTGCAGC TGCCCGCCGT CGTCCCCGCG
GTCGTGTCGG GCCTGCGGCT CGCGCTGGCG CAGGCGTGGC TGTTCCTCGT CGCCGCCGAG
CTCCTCAACT CCTCGATGGG GCTCGGCTTC CTCCTGCTCG ACTCCGGCCA GAACGGCCGC
GTCGACCGCA TGATCCTCGC CATCGTGCTG CTGGCCGTGC TCGGGAAGGC GACGGACGGC
GTCGTCGGCC TCGCTGAGCG GTACCTGCTG CGCCGGTGGT CCGACCCTGA AGGAGCCGCG
ACATGA
 
Protein sequence
MPTVTPSDTA LGTATATSDV ATAVALSVPH GADPGRPHGR ATTRRSRWWR TAVGLIVPLL 
LLAAWQLVTA TGVVPAYQLP SPGSVWDAAV DLAQRGVLGQ YVAISTQRVL IGFAIGGLLG
LAVGSVVGLS RLSAALFAPT LAGARAVPSL AWVPLLVLWI GINEDSKVIL IAIGAFFPVY
TTVAGALRHV DPHLVEAGRA YGLCGPRLLA RVQLPAVVPA VVSGLRLALA QAWLFLVAAE
LLNSSMGLGF LLLDSGQNGR VDRMILAIVL LAVLGKATDG VVGLAERYLL RRWSDPEGAA
T