Gene Bcav_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3427 
Symbol 
ID7859200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3825760 
End bp3826785 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content76% 
IMG OID643867526 
ProductNUDIX hydrolase 
Protein accessionYP_002883431 
Protein GI229821905 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGCT CCCGCCCGAC GGTGCACGCC GCCGGGGCGC TCGTCTGGCG TCGCTCGCGC 
CGCACCCTGC AGGTGCTGCT CGTCCATCGC CCCCGCTACG ACGACTGGTC CTGGCCGAAG
GGGAAGCTCG ACCCCGGTGA GACGCTCCCG GCGTGCGCGG TGCGCGAAGT CGCGGAGGAG
ACCGGCCTCC AGGTGGTGCT GGGGGTGCCG CTGCCGCAGG TGCGCTATCG CGTGGCCGAC
GGCCGCCTCA AGGCGTGCCA CTACTGGGCG GCGCAGGCGG CCGACGACGG CGACCCCTCC
CTGCGCGCCC GTCCCGCCGT CACGCCGTGC CACCCGACGG AGATCGACGA GGCCAGGTGG
GTCGACGTGC GCACGGCCCG CAAGATGCTC ACCCGCGCGG ACGACCGTGC GCCGCTCGAC
GCCCTCGTCG ACCTCTGGGA CGAGGGTGCG CTCACGACGC GCACGCTCGT CGTCGTCCGC
CACGCCCGCG CTCGCAAGCG CGCCGCCTGG AACCGCGGGG AGAACACGCG GCCACTCACG
CGCGCCGGTG CGACGCAGGC CGCTGCCCTC GCCCCGCTGC TGGCGGCGTT CGGCGTCCGG
CGTCTCGTCA GCAGCCCGTG GCGGCGCTGC ACGGCGACGC TCGAGCCGTA CGCGTCGTCG
GCACGGCTCG CCGTCGAGAC CCGCGACGAG CTCACCGAGG CGGCGCACAA GCGCTCGCGG
TCGGGCGTGC GGGGTGTGGT GACTCAGCTC GTGCGGGCCG CCGCGGCACG GGCGGCGTCT
CCCGCCGGCG AGGGGAACCC GGGCGGGCTC GCGCCGTCGG CGGACGGTGT GATCGCGCTG
TGCACGCACC GGCCCGTGCT GCCGACCCTC GTCGAGGTGC TCGAGGCGAG GTCGCCGAGC
CGCGTGCGCA AGGTGCTCCC GTCGGCGGAC CCGTACCTCA AGCCCGGCGA GATCCTCGTC
GTGCACCTGT GGCCGCGCCA GCGCCGCAAG ACGCGCGTGA TCGCCGTCGA GCGGCACCGC
CCCTGA
 
Protein sequence
MSRSRPTVHA AGALVWRRSR RTLQVLLVHR PRYDDWSWPK GKLDPGETLP ACAVREVAEE 
TGLQVVLGVP LPQVRYRVAD GRLKACHYWA AQAADDGDPS LRARPAVTPC HPTEIDEARW
VDVRTARKML TRADDRAPLD ALVDLWDEGA LTTRTLVVVR HARARKRAAW NRGENTRPLT
RAGATQAAAL APLLAAFGVR RLVSSPWRRC TATLEPYASS ARLAVETRDE LTEAAHKRSR
SGVRGVVTQL VRAAAARAAS PAGEGNPGGL APSADGVIAL CTHRPVLPTL VEVLEARSPS
RVRKVLPSAD PYLKPGEILV VHLWPRQRRK TRVIAVERHR P