Gene Bcav_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3420 
Symbol 
ID7859193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3819243 
End bp3819875 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID643867519 
Productprotein of unknown function DUF47 
Protein accessionYP_002883424 
Protein GI229821898 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGC GACTCACGCC CCGCGATGCG ACGTTCTTCG ACCTCTTCGC CGGCCAGGCG 
CAGTACCTGG TGACCGGTGC GGACCTGCTG GCACAGATCG TCGGCGCCGA CCCGGAGGAG
CGCCCCACGA TCGCGGGCCG CCTCCGCGAC GCCGAGCACG ACGCCGACGA GGCCACGCAC
ACGATCATGC GGCGGCTCAA CCAGACGTTC GTGACGCCGT TCGACCGGGA CGACATCTAC
GAGCTCGCGT CGAGCCTCGA CGACTGCATG GACGAGATGG AGGAGGCCGG CGACCTCATC
GTCCTGTACC AGCTCGGGGA CCTCCCGAAG CAGGTCGTGC GCCAGGTCGG CGTGCTGCAG
CGGTGCGCCG AGCTGACCGC CCTGGCGATG CCGCGCCTGC GGTCGATGCA GGACCTCAGC
GACTACTGGG TCGAGGTGAA CCGCCTCGAG AACGAGGCCG ACCGCGCCTA CCGCAAGCTG
CTGGCCGGCA TCTACGAGGG GAAGACGCCG GCGGGCACCG ACCCGCTGGC GATCATGAAG
CTCAAGGAGG TCATCGACGT CCTCGAGTCC GCGGCCGATG CGTTCGAGAA GGTGGCGAAC
ACCGTCGAGA CGATCGCTCT CAAGGAAGCC TGA
 
Protein sequence
MRLRLTPRDA TFFDLFAGQA QYLVTGADLL AQIVGADPEE RPTIAGRLRD AEHDADEATH 
TIMRRLNQTF VTPFDRDDIY ELASSLDDCM DEMEEAGDLI VLYQLGDLPK QVVRQVGVLQ
RCAELTALAM PRLRSMQDLS DYWVEVNRLE NEADRAYRKL LAGIYEGKTP AGTDPLAIMK
LKEVIDVLES AADAFEKVAN TVETIALKEA