Gene Bcav_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3419 
Symbol 
ID7859192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3818270 
End bp3818992 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID643867518 
Productputative two component transcriptional regulator, winged helix family 
Protein accessionYP_002883423 
Protein GI229821897 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGACC TGTTGCTGCT CACGTCCGAG CCGGGAGGCT CCGCCCAGGT CCTGCCCGCC 
CTGTCGCTGC TCAACCACCG CATCCGCGTC CTGCCCGTCG AACCCTCCGC TCTCCTCGAC
GCCCCGGACG CCGACGTCGT GCTGCTCGAC GCGCGGCGGG ACCTCGTCAC CGCGCGCACC
ACGTGCCGCC TGCTCCGCTC GACGGGCCTG GCCGTGCCGC TGCTCCTCGT GCTGACCGAG
GGCGGGCTGA CGGTGGTGAC GGCTGACTGG GGCACGGACG ACATCATCCT CGACACGGCG
GGTCCGGCCG AGCTCACGAC CCGGCTCCGC CTGCTCGCGG AGCGCGGCGC CACGCAGCGT
GGGGCGGACG AGCCGACCGA GATCGAGGCC GGCGAGCTGA TGATCGACCC CAGCGGGTAC
ACGGTCCGGC TGCGGGGCCG GCCCCTCGAC CTCACGTACA AGGAGTTCGA GCTCCTGAAG
TACCTCGTGC AGCATCCCGG CCGGGTGTTC ACCCGGGCGC AGCTCCTGCA GGAGGTGTGG
GGGTACGACT ACTACGGGGG CACGCGCACC GTGGACGTCC ACGTGCGGCG GCTGCGCGCG
AAGCTCGGCA CCGAGCACGA GCAGCTCATC GGCACGGTGC GCAACGTCGG CTACCGGTTC
GACCCTCCCC GGGAGCGGCG CGTCGCGGAG CCGCCGCCGG CGTCCGACGG ACCGGCCGCC
TGA
 
Protein sequence
MADLLLLTSE PGGSAQVLPA LSLLNHRIRV LPVEPSALLD APDADVVLLD ARRDLVTART 
TCRLLRSTGL AVPLLLVLTE GGLTVVTADW GTDDIILDTA GPAELTTRLR LLAERGATQR
GADEPTEIEA GELMIDPSGY TVRLRGRPLD LTYKEFELLK YLVQHPGRVF TRAQLLQEVW
GYDYYGGTRT VDVHVRRLRA KLGTEHEQLI GTVRNVGYRF DPPRERRVAE PPPASDGPAA