Gene Bcav_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3414 
Symbol 
ID7859187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3814259 
End bp3815398 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content77% 
IMG OID643867513 
Producthypothetical protein 
Protein accessionYP_002883418 
Protein GI229821892 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCC GGCTGCGAGC GTGGCGCGTC GCGGCGCGCT CCCGGACCCG CCAGGGTGTC 
GTGCGGGTCC GGACGGCGTT CGTGCCCGTG CTCTGGGCGT CGCTGGCCGC CGGCGTCGCT
GTCGCGATCG CGTACGTCGG GCTCGGCCAC ACCTACCCGT TCTTCGCGGC GATCGCGGCG
TGGGTCTGCC TCGGCTTCAG CCCGGACGTG CAGCCGCGGC GGGTCGGCGA GCTCGCGCTG
GGCGTCTCGC TCGGCGTCGG CCTCGGGGAG CTGTTCGCCC ATCTGTTCGG CACCGGACCG
GTGCAGATCG CCGTCGTCCT CTTCCTGGCC GCGCTCGTGG CGCGGTTCCT CGACGCCGGG
CAGATGTTCA CGACCCAGTC GGGCGTCCAG GCGATCGTCG TCGTGGGGCT GCCGGCGATC
GCCGTCTCGT CCGGGCCGGT CGGGCGTTGG ACCGACGCCC TCATCGGCGG CGGGGTGGCG
CTGCTGTTCT CGGCGTTCCT GCCGGGCGAC CCGCGCACGC GCCCGCGCGC GCTCGGCCGT
GAGGTGCTGC TCGAGCTCGC CGACGTGCTC GGCGCGCTCA CCGAGGGCCT GCGGCTCGGC
GACGCGCACC GGATCGAGGA CGCCCTCGTC GCGGCGCGCG GGACCCAGAC CCCGATCGAC
TCCTGGCGCG GGGCCGTGAC GTCGGCCCAG CAGACGACAC GCATCTCGCC CGCCTGGCGG
CGTCGGGCCG GCGAGATCGC GGAGCTCGAC CGCGCGTGCA CGCTCGCCGA CCGAGCGATC
CGCAACGCCC GCGTGCTCGC CCGCCGCGCC GCCGTGGCCG TGCGCGACGG CTTCGACCCG
GGTCCCGTCC CGGCCCAGAC GCACGCGCTG TCCGTCGCCG CCCGGGAGCT GGCGCAGGCG
GTGGGGAGCG GGAGCGACGC CGCGGCCGCA CGGTCGGCGC TCGCCGATGT CGCCGCCCAC
CTGCGCCCGG AGGACTTCGA GGGATGGCGC CAGCAGTCGC TCGTCATCCT CATGAGGTCC
CTCACCACCG ACCTCCTGCA GCTCACCGGG ATGCCGTACG CCCAGGCGCG CGCCACCTTC
CCCGGCGGCC CGGGTGACGA CGGCGCCGCG CCACCGCCGT CGTCGTCGCC CGCTGTGTGA
 
Protein sequence
MPGRLRAWRV AARSRTRQGV VRVRTAFVPV LWASLAAGVA VAIAYVGLGH TYPFFAAIAA 
WVCLGFSPDV QPRRVGELAL GVSLGVGLGE LFAHLFGTGP VQIAVVLFLA ALVARFLDAG
QMFTTQSGVQ AIVVVGLPAI AVSSGPVGRW TDALIGGGVA LLFSAFLPGD PRTRPRALGR
EVLLELADVL GALTEGLRLG DAHRIEDALV AARGTQTPID SWRGAVTSAQ QTTRISPAWR
RRAGEIAELD RACTLADRAI RNARVLARRA AVAVRDGFDP GPVPAQTHAL SVAARELAQA
VGSGSDAAAA RSALADVAAH LRPEDFEGWR QQSLVILMRS LTTDLLQLTG MPYAQARATF
PGGPGDDGAA PPPSSSPAV