| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3404 |
|---|
| Symbol | |
|---|
| ID | 7859177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3804533 |
|---|
| End bp | 3807064 |
|---|
| Gene Length | 2532 bp |
|---|
| Protein Length | 843 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643867503 |
|---|
| Product | ATPase AAA-2 domain protein |
|---|
| Protein accession | YP_002883408 |
|---|
| Protein GI | 229821882 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGA GGTTCACGGA CCGAGCCCGC CGGGTCGTCG TCCTCGCCCA AGAAGAGGCG
AGGCTCCTCA ACCACAACTA CATCGGGACC GAGCACATCC TCCTGGGCCT CATCCACGAG
GGCGAGGGGG TCGCCGCCAA GGCGCTGGAG TCGCTCGGCA TCTCGCTCGA CATCGTCCGC
CAGCAGGTCA TCGAGATCAT CGGCGAGGGC CAGCAGGCCC CGACCGGGCA CATCCCGTTC
ACGCCGCGCG CCAAGAAGGT GCTCGAGCTC TCGCTGCGCG AGGCGCTCCA GCTCGGCCAC
AACTACATCG GCACCGAGCA CATCCTCCTG GGTCTCATCC GGGAGGGCGA GGGAGTCGCG
GCGCAGGTGC TCGGCAAGCT CGGCGCCGAC CTGAACCGCG TCCGCCAGCA GGTGCTGCAG
CTGGTCCAGG GCTACCAGGG CAAGGAGCCC GTGGCAGCCG GCGGTCCCAC CGAGGGTCAG
CCCTCGGGCT CGGCCGTGCT CGACCAGTTC GGCCGCAACC TCACGCAGGC TGCGCGCGAG
GGCAAGCTCG ACCCGGTCAT CGGGCGCGAG ACGGAGACCG AGCGGGTCAT GCAGGTCCTG
TCCCGCCGCA CGAAGAACAA CCCCGTGCTC GTCGGCGAGC CCGGCGTCGG CAAGACCGCC
GTCGTCGAGG GCCTCGCGCA GGACATCGTC CGCGGCGACG TGCCCGAGAC GCTCAAGGAC
AAGCAGCTGT ACACGCTCGA CCTCGGCGCG CTCGTCGCGG GGTCGCGCTA CCGCGGTGAC
TTCGAGGAGC GCCTGAAGAA GGTGCTCAAG GAGATCCGCA CGCGCGGCGA CATCATCCTG
TTCATCGACG AGATCCACAC GCTCGTCGGG GCGGGCGCCG CGGAGGGCGC GATCGACGCC
GCGAGCATCC TCAAGCCGAT GCTGGCGCGT GGCGAGCTGC AGACGATCGG CGCGACGACG
CTCGACGAGT ACCGCAAGTA CGTCGAGAAG GACCCGGCGC TCGAGCGTCG GTTCCAGCCG
ATCACCGTCA ACGAGCCGAG CCTCACGCAC GCCATCGACA TCCTCAAGGG CGTGCGCGAC
CGGTACGAGG CGCACCACCG CGTCTCGATC ACCGACGCCG CGCTCGTCGC GGCGGCCACG
CTCGCCGACC GGTACGTCAA CGACCGCTAC CTGCCCGACA AGGCGATCGA CCTCATCGAC
GAGGCGGGCG CGCGCCTGCG CATCCGCCGG ATGACGGCCC CGCCGGAGCT GCGCGAGCTC
GACGACCAGA TCGCCGAGAC GCGCCGCTCG AAGGAGTCGG CGATCGACGA CCAGGACTTC
GAGCGCGCCG CCCGTCTGCG CGACGAGGAG AAGCAGCTGA CGAACCGCCG TCTCGACCGC
GAGAAGGCGT GGAAGTCGGG TGACCTCGAC GCCGTCGCGG AGGTCGACGA GGAGCTGATC
GCCGAGGTGC TCGCCGCCTC GACGGGCATC CCCGTGTTCA AGCTGACCGA GGAGGAGTCC
TCGCGGCTGC TGCGCATGGA GGACGAGCTG CACAAGCGGA TCGTCGGCCA GGAGGCGGCC
GTCAAGGCGC TGTCGCAGGC CATCCGCCGC ACGCGGGCCG GCCTCAAGGA CCCGAAGCGC
CCGGGTGGGT CGTTCATCTT CGCCGGCCCG ACCGGCGTCG GAAAGACGCT GCTCGCGCGG
ACGCTCGCGG AGTTCCTGTT CGGCGACGAG GACGCGCTCA TCCAGCTCGA CATGAGCGAG
TTCTCCGAGA AGCACACGGT CTCGCGGCTG TTCGGCTCCC CGCCCGGCTA CGTCGGGTAC
GAGGAGGGCG GCCAGCTCAC GGAGAAGGTG CGGCGCCGTC CGTTCTCGGT GGTGCTGTTC
GACGAGGTGG AGAAGGCCCA CGCGGACATC TTCAACTCGC TGCTGCAGAT CCTCGAGGAC
GGTCGCCTGA CGGACAGCCA GGGCCGCGTC GTCGACTTCA AGAACACCGT GATCATCATG
ACCACGAACC TCGGCACGCG GGACATCGCC AAGGGGCTCC AGACGGGGTT CCAGGCCGGC
GGTGACCTGT CGACGAGCTA CGAGCGCATG AAGGCCAAGG TGAACGACGA GCTCAAGCAG
CACTTCCGGC CGGAGTTCCT CAACCGCGTG GACGACGTGA TCGTCTTCCC GACGCTCTCG
CAGGAGGAGA TCTTCGCGAT CGTCGACTTC GAGATCGCGA AGGTGGACAA GCGCCTGGCC
GACAAGGACA TGGCGATCGA GATCACGCCC GCCGCGAAGG CCCTGCTCGC CGAGAAGGGC
TACGACCCGG TGCTCGGGGC ACGGCCCCTG CGCCGCGCGA TCCAGCGGGA GATCGAGGAC
CAGCTGTCCG AGAAGATCCT GTTCGGGGAG CTCAAGGCCG GCCAGAAGGT CACGGTCGAC
GCCGTCGGCG AAGGCCTGCT GGGCGAGTTC ACGTTCGTCG GTTCGCCGCG GTCGGCGGAC
GCCGAGCCGG TCGCCGTCGG CGCCGGTCCC GGTGGCACGG TGACCGACGC GGAGCTGCCG
CGGCTCGACT GA
|
|---|
| Protein sequence | MFERFTDRAR RVVVLAQEEA RLLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLDIVR
QQVIEIIGEG QQAPTGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLGKLGAD LNRVRQQVLQ LVQGYQGKEP VAAGGPTEGQ PSGSAVLDQF GRNLTQAARE
GKLDPVIGRE TETERVMQVL SRRTKNNPVL VGEPGVGKTA VVEGLAQDIV RGDVPETLKD
KQLYTLDLGA LVAGSRYRGD FEERLKKVLK EIRTRGDIIL FIDEIHTLVG AGAAEGAIDA
ASILKPMLAR GELQTIGATT LDEYRKYVEK DPALERRFQP ITVNEPSLTH AIDILKGVRD
RYEAHHRVSI TDAALVAAAT LADRYVNDRY LPDKAIDLID EAGARLRIRR MTAPPELREL
DDQIAETRRS KESAIDDQDF ERAARLRDEE KQLTNRRLDR EKAWKSGDLD AVAEVDEELI
AEVLAASTGI PVFKLTEEES SRLLRMEDEL HKRIVGQEAA VKALSQAIRR TRAGLKDPKR
PGGSFIFAGP TGVGKTLLAR TLAEFLFGDE DALIQLDMSE FSEKHTVSRL FGSPPGYVGY
EEGGQLTEKV RRRPFSVVLF DEVEKAHADI FNSLLQILED GRLTDSQGRV VDFKNTVIIM
TTNLGTRDIA KGLQTGFQAG GDLSTSYERM KAKVNDELKQ HFRPEFLNRV DDVIVFPTLS
QEEIFAIVDF EIAKVDKRLA DKDMAIEITP AAKALLAEKG YDPVLGARPL RRAIQREIED
QLSEKILFGE LKAGQKVTVD AVGEGLLGEF TFVGSPRSAD AEPVAVGAGP GGTVTDAELP
RLD
|
|---|
| |