Gene Bcav_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3373 
Symbol 
ID7860339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3756871 
End bp3758481 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content69% 
IMG OID643867472 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_002883377 
Protein GI229821851 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.346982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.514599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG GCAGCCCGGT CGTCAACATC GCGATCTTCG GCGGCTTCGT CGCACTGACC 
CTGATCATCG TCATCCGCGC CTCCCGCAAC AACCGCACGA CAGCCGACTT CTACGCCGGC
GGACGGGCGT TCACCGGCCA GCAGAACGGG ATAGCGATCG CTGGCGACTA CCTCTCAGCG
GCGTCGTTCC TCGGCATCGC CGGCGCGATC GCCGTCTACG GCTACGACGG GTTCCTGTAC
TCGATCGGGT TCCTCGTCGC CTGGCTCGTC GCGCTCCTGC TCGTCGCGGA GCTCCTGCGC
AACACCGGCC GGTTCACGAT GGCGGACGTC CTGTCGTTCC GCATGCGGCA GCGTCCGGTG
CGGATGGCGG CGGCGACGTC GACCCTCGCG GTCTCGTTCT TCTATCTCCT CGCGCAGATG
GCCGGGGCGG GCGGCCTCGT GGCGCTGCTG CTGGGCATCA CCGATCGCGG AGGGCAGTCG
CTGGTGATCG CCGTCGTCGG CGCGATCATG GTCTTCTACG TGCTGGTCGG CGGGATGAAG
GGCACGACCT GGGTGCAGAT CGTCAAGGCG GTGCTGCTCA TCGCGGGGGC CGGCGGCATG
ACGCTGTGGA TCCTCGCGAA GTACGACTTC AACCTGTCGG CCGTGCTCGG TGCCGCCGTC
GACGCCGCGG GAGCCGAGGG CGCGCACCTG CTCGAGCCCA TGAACCAGTA CGGCGCGTCC
GCGCTGACGA AGGTCGACTT CATCTCCCTC GCGCTGGCCC TCGTGCTCGG TACCGCCGGG
CTGCCGCACG TGCTCATGCG CTTCTACACG GTGCCGTCCG CGAAGGCGGC GCGGAAGTCC
GTGACCTGGG CGATCGCGCT CATCGGGCTG TTCTATCTAT TCACGCTCGT GCTGGGCTAC
GGCGCCGGCG CGCTGGTGGG TGCCGACGAG ATCCTGGCGG CGCCGGGCGG TGTGAACTCC
GCGGCACCGC TGCTCGCCTA CGAGCTCGGC GGGACTCTCC TGCTCGGGTT CATCTCCGCC
GTCGCGTTCG CGACCATCCT GGCCGTGGTC GCGGGTCTGA CGATCACGGC GTCGGCGTCG
TTCTCGCACG ACGTGTACGC CAACGTGATC AAGAAGGGCG ACGTCAGCCC GCAGAAGGAG
GTGCGGGTCG CGCGATCGAC GGCGCTCGTC GTCGGTGCCG TCGCGATCGT CGGCGGCGTG
CTCGCGAACG GGCAGAACAT CGCGTTCCTC GTGGCGCTCG CGTTCGCCGT CGCCGCGAGC
GCGAATCTCC CGGTGATCCT GTACTCGCTG TTCTGGAAGC GGTTCAACAC GCGCGGTGCG
GTCTGGGCGA TCTACGGCGG CCTCATCACC GCCGTCACGC TCATCGTGTT CTCGCCGGTG
GTCTCGGGCA AGCCCGACAA TCCCGCCACC GGGCGGAGCG CGTCGATGCT CGACGGCGTG
GACTTCCACT GGTTCCCGCT GGACAACCCG GGCATCATCT CGATCCCCGC CGGGTTCTTC
TTCGGGTGGC TGGGGGCGCG GCTGTCGAAG GAGTTCAACG CCCCGAAGTA CGCGGAGATG
GAGGTGCGGT CGCTCACCGG CGCCGGCGCC GAGAAGGCGG TCACGCACTG A
 
Protein sequence
MDIGSPVVNI AIFGGFVALT LIIVIRASRN NRTTADFYAG GRAFTGQQNG IAIAGDYLSA 
ASFLGIAGAI AVYGYDGFLY SIGFLVAWLV ALLLVAELLR NTGRFTMADV LSFRMRQRPV
RMAAATSTLA VSFFYLLAQM AGAGGLVALL LGITDRGGQS LVIAVVGAIM VFYVLVGGMK
GTTWVQIVKA VLLIAGAGGM TLWILAKYDF NLSAVLGAAV DAAGAEGAHL LEPMNQYGAS
ALTKVDFISL ALALVLGTAG LPHVLMRFYT VPSAKAARKS VTWAIALIGL FYLFTLVLGY
GAGALVGADE ILAAPGGVNS AAPLLAYELG GTLLLGFISA VAFATILAVV AGLTITASAS
FSHDVYANVI KKGDVSPQKE VRVARSTALV VGAVAIVGGV LANGQNIAFL VALAFAVAAS
ANLPVILYSL FWKRFNTRGA VWAIYGGLIT AVTLIVFSPV VSGKPDNPAT GRSASMLDGV
DFHWFPLDNP GIISIPAGFF FGWLGARLSK EFNAPKYAEM EVRSLTGAGA EKAVTH