Gene Bcav_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3347 
Symbol 
ID7860313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3719996 
End bp3721225 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content75% 
IMG OID643867447 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_002883352 
Protein GI229821826 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CCACCCCGTC CCTGGCCGTG CACGGCGGAC GCGCCGAGCT CGACGGCCTC 
CCCGACTTCC CGACCTGGCC GCAGTCCGGC GCGGAGGAGG AGCGCGGGAT CCTCGACGTG
CTGCACTCCG GGAAGTGGGG CAGCACGCAC GGCGACGTCG TCGCGACCTT CGAGCAGGAG
TTCGCGCAGG CGCAGCAGGC GAGGCACGCC ATCGCCCTGT CCAACGGCAC CCTGGCCCTG
GCCGCGGCTC TGCGCGCCGC CGGCGTGGGG GTGGGCGACG AGGTGATCGT CCCCCCGTAC
ACGTTCATCG CGACGGCCGC GGCCCCCCTG TTCGTCGGCG CCGTCCCCGT GTTCGCCGAC
GTCGACGCGT CCACCCACCT GCTCGACCCG GCCGCGACCG AGGCCGCGAT CACCGAGCGG
ACCAAGGCCG TGATGCCCGT CCACCTCGCC GGGAACGTCG CCGATATGAC GGCGTTCGCC
GAGCTCGGCC GCCGGCACGG GATCGCCGTC ATCGAGGACT CCGCGCAGGC GGTCGGCGCG
CAGTGGGGGG GCCGCGGCGT CGGCACGCTC GGCGACCTCG GCACGTTCAG CTTCCAGACC
TCGAAGAACA TGAGTGCCGG CGAGGGCGGC ATCGTCACGA CCGACGACGA CGAGCTCGCG
GGCGCCGTGT ACTCGCTCGT CAACGTCGGC CGCGTCCCCG GCGGCGGCTG GTACCAGCAC
GCCGCCGTCG GCTACAACCT GCGCCTCACC GAGTTCCAGG GCGCGATCCT GCGTGCCCAG
CTCGCGCGCC TGCCCGAGCA GCAGGCCGTG CGCGAGACGA ACGCTCGGGC ACTGCAGGAG
CAGCTCGCCG GCGTCGAGGG CGTCGCCGTC GCACCGCTGG ACCCCTGCGT CACGGCGCAC
GGACGCCACC TCTTCATCTT CCGCGTGCCG GAGCTCGGCG ACGCCGGGCT GCGCGACGCC
GCCGCCCGGG CGCTCGCCGC CGAGGGCGTG CCGGGCGTGT CCACCGGGTA CGTCCCGCTG
CACCGCAACG CAGCGCTCGT CGCCGAGACG CGTGCCCTCG CCCAGCGGCT CGGGCAGCCG
GTGCCGGAGG CCGCGTGCCC GCGCGCCGAC CAGGTCAGCC GCGACACCCT GTGGCTCCCG
CAGCACGTGC TGCTCGGCTC CGCGGAGCAG GTGGCCGCCG TCGGGCGGGC CATCGCGAAG
GTCGCGCGCT CGGCCCACGA GCTCGCGTGA
 
Protein sequence
MTVTTPSLAV HGGRAELDGL PDFPTWPQSG AEEERGILDV LHSGKWGSTH GDVVATFEQE 
FAQAQQARHA IALSNGTLAL AAALRAAGVG VGDEVIVPPY TFIATAAAPL FVGAVPVFAD
VDASTHLLDP AATEAAITER TKAVMPVHLA GNVADMTAFA ELGRRHGIAV IEDSAQAVGA
QWGGRGVGTL GDLGTFSFQT SKNMSAGEGG IVTTDDDELA GAVYSLVNVG RVPGGGWYQH
AAVGYNLRLT EFQGAILRAQ LARLPEQQAV RETNARALQE QLAGVEGVAV APLDPCVTAH
GRHLFIFRVP ELGDAGLRDA AARALAAEGV PGVSTGYVPL HRNAALVAET RALAQRLGQP
VPEAACPRAD QVSRDTLWLP QHVLLGSAEQ VAAVGRAIAK VARSAHELA