Gene Bcav_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3297 
Symbol 
ID7861769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3653995 
End bp3654690 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content76% 
IMG OID643867397 
ProductATP-binding protein 
Protein accessionYP_002883302 
Protein GI229821776 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.187999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000867237 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGTGCCCT TCCCGACGAC GCCCGAGCCC GCGTCGCCGG CCGATCCTCC CCTCTTCGAC 
CTGCCGTCCG GCGCCCGCGT CCCGCGCCGC CGAGTCGTGC TCGTGACGGG TCCGTCGGGT
TCCGGGAAGA CGTCGCTCGC ACGCCGGCTC GGCCTGCCCG TGGTCAACCT CGACGACTTC
TACCGCGACG CCGACCACCC GGGCCTGCCG CGCCGGCACG GGATCGTCGA CTGGGACTCG
CCGGCCACCT GGGACGTCGA GGCGGCCCAC GCGGCCCTGC TGGACGCCTG CCGGTCCGAC
CGCGTCGACG TGCCGGTGTA CGACATCCCG ACCTCGCAGC GCACCGGGAC GCAGACCGTC
GACCTCGACG CCGCCCCGCT CGTGCTGGCC GAGGGGATCT TCGCCGCCGA GCTGGTCGAC
CCGCTGAGCC GCGACGGCGT GCTCGCCGAC GCCGTCCACC TCACGCAGGG CAGGCTCGTC
ACGTTCTGGC GGCGGCTCGC GCGCGACGTC GGCGAGTCGC GCAAGCCGAT CGCGGCCCTG
CTGCGCCGCG GCACCCACCT GCTCCTCGCC GAACCCCGGA TGGTGCGCCG GTGGGAGTCC
CAGGGCACCC GGCCGCTGGC CGTCGAGGCC GCCGAGCACG AGCTGCGCGC CCTCGCGGCG
CACGAGAGGA CGCGACATGA GCGCCACCCC ACCTGA
 
Protein sequence
MVPFPTTPEP ASPADPPLFD LPSGARVPRR RVVLVTGPSG SGKTSLARRL GLPVVNLDDF 
YRDADHPGLP RRHGIVDWDS PATWDVEAAH AALLDACRSD RVDVPVYDIP TSQRTGTQTV
DLDAAPLVLA EGIFAAELVD PLSRDGVLAD AVHLTQGRLV TFWRRLARDV GESRKPIAAL
LRRGTHLLLA EPRMVRRWES QGTRPLAVEA AEHELRALAA HERTRHERHP T