Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3292 |
Symbol | |
ID | 7861764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3648297 |
End bp | 3649763 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643867392 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_002883297 |
Protein GI | 229821771 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.223704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00299224 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCTCGA TCGACGCCCC GCTCACTCGC CGCGTGATGC TCGGCGGCAC GGCCGCAGCC GCCGGCGCTC TCGCCCTCGG TCCGGCCGCC GCACACGCCG GAGGGGGCCG CCCCGGCCAT CCGCCCACCT ATGTGGACGC GACCGTCCAC GACCCCGACG TCGTCCGAAC CGGCGGCCGC TACTACGTCT TCGGTTCCCA CGCCGCCGCC GCTTCCACGG AAGATCTGTT CGCCTGGGAC CAGATCGCCT ACGACGGCGT GACGCCGGAG AACCCGCTGT TCGACGACGT CACCGTCGAG CTCGCCGAGG TGCTCGAGTG GGCCCGGACG ACGACGCTCT GGGCGCCGGA CGTCAGCCGG CTCCCGGACG GCCGCTTCTA CTACTACTAC TGCGCGTGCG AGGGGACGTC GCCGCGGTCA GGGCTCGGCG TCGCCGTCGC CGACGAGGTC ACCGGCCCGT ACCGCGACCT CGGCATCATC CTGCGCTCCG GGCAGGACGA CGGCACGAGC GAGGAGCCGG GCGAGGCGTA CGACCCGTGG GTCCACCCCA ACGTCATCGA CGCCGATGTG TTCGCCGACG ACGACGGCAC CTGGTGGATG GTCTACGGCT CGTTCTCCGG TGGCATCCTC CTGCTCGAGC TCGACCCGGC GACGGCGAAG CCCGTCCCGG GGCAGGGGTA CGGGCGGCAC CTCATGGGCG GCAACCACGC CCGCATCGAG GGCCCGGCGA TCATGTACCA CCCCGGCACC CGCTACTACT ACCTGTTCGT GACGTTCGGC GGCCTCGACG CCGCGGGCGG CTACAACATC CGCGTGTCCC GCGCGCGGAC GCCGGAGGGT CCGTGGTTCG ACATCTCCGG CACGGACATG TCGACGGTCA AGGCGGATCC CGACCTGCCG CTGTTCGACG ACGTCACGAT CGCGCCCCAC GGCACGAAGA TCGCCGGCAA CGTCCGCTTC CGGACGCCGG ACGGCGCACC CGGAACGGGA TACGTCTCGC CCGGCGGCTG CTCGCCCTGG TACGACGAGG AGTCGGGCGA CGCGTTCCTC GCGTTCCACA CCCGCTTCCC CGGCACGGGC GAGATCCACA ACGTGCGCGT CCACCGGCTC GCCATGACCC GGTCCGGCTG GCCCGTCGTC CTCCCGTTCC GGTACGCCGG GGAGCGCCTC GGTGGCCTCG GTCGCCACGA CGTCGCCGGC GACTACGAGG TGGTGACGAT GGCGAAGCCC ATCGGCCCCG AGATCGCCGA GTCCCGCCCG GTGACGCTGA CGCGGAACGG ACGCGTCACC GGGGAGCACA CCGGCCGCTG GCGGCTCACC GGCCGCTCGC ACGTGGTCCT CGAGCTCGAC GACGTCACGT ACTCCGGTGT CGCCGCGACG CAGTGGGACC CCGATCTCGA GGCGTGGTCG GTGACGTTCT CCGCGGTGTC CGACGCCGGC ACGTCCGTGT GGGGCGCGCG CCGCTGA
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Protein sequence | MPSIDAPLTR RVMLGGTAAA AGALALGPAA AHAGGGRPGH PPTYVDATVH DPDVVRTGGR YYVFGSHAAA ASTEDLFAWD QIAYDGVTPE NPLFDDVTVE LAEVLEWART TTLWAPDVSR LPDGRFYYYY CACEGTSPRS GLGVAVADEV TGPYRDLGII LRSGQDDGTS EEPGEAYDPW VHPNVIDADV FADDDGTWWM VYGSFSGGIL LLELDPATAK PVPGQGYGRH LMGGNHARIE GPAIMYHPGT RYYYLFVTFG GLDAAGGYNI RVSRARTPEG PWFDISGTDM STVKADPDLP LFDDVTIAPH GTKIAGNVRF RTPDGAPGTG YVSPGGCSPW YDEESGDAFL AFHTRFPGTG EIHNVRVHRL AMTRSGWPVV LPFRYAGERL GGLGRHDVAG DYEVVTMAKP IGPEIAESRP VTLTRNGRVT GEHTGRWRLT GRSHVVLELD DVTYSGVAAT QWDPDLEAWS VTFSAVSDAG TSVWGARR
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