Gene Bcav_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3289 
Symbol 
ID7861761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3644013 
End bp3645761 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content72% 
IMG OID643867389 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002883294 
Protein GI229821768 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.398024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.023153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAT CGACCGTGAC GGGGCAGACC CGTCTCGAGG CACTCGCCAG GATGAGCAGC 
GACGAGCCCC TCGACGTGCT GGTCATCGGA GGCGGGGTGA CCGGTGCGGG CATCGCGCTG
GACGCCGTGA CCCGTGGGCT GCGGACCGGG ATCGTCGAGG CCCAGGACTG GGCCAGCGGC
ACGTCGAGCC GGTCGAGCAA GCTCGTCCAC GGTGGCCTGC GCTACCTGCA GATGCTCGAC
TTCCACCTCG TCCACGAGGC CCTGACGGAG CGCGACCTGC TCATCACGCA GCTCGCGCCG
CACCTCGTCA AGCCCGTGTC GTTCCTGTAC CCGCTCGAGC ACCGCGTGTG GGAGCGCGCC
TACGTGGGCG CCGGCGTCGC CCTCTACGAC ACGCTCGCCT CGATCAACGG ACGCCGGCGC
GCGCTCCCCC TGCACCGGCA CGTGACCCGG TCCGGCATGG AGCGGCTGTT CCCCGACCTG
CGCCACGACG CCGCGATCGG CGCCGTCCGG TACTGGGACG CCTCGGTCGA CGACGCCCGG
CTGGTCATCA CGCTCATCCG CACAGCGGCG TCGTACGGCG CTCTCGCGGC GAGCCGCACC
CAAGTCGTCT CGCTCACCAA GTCCGGCATC GGCCGCGTCG ACGGCGCCAT CGTCGCCGAC
CTGGAGACCG GCGAGCAGCA CACGATCCGC GCGACCCACG TCGTCAACGC GACGGGCGTG
TGGACGGAGA AGACCGAGGC GCTCGCCGGC ACGGAGGGCG GGCTGCGCGT CCTGGCGTCC
AAGGGCATCC ACATCGTCGT CCCGCGCGAG CGGATCAAGG GCGAGGTCGG ACTCATCCTC
CAGACCGAGA AGAGCGTCCT GTTCGTGATC CCGTGGTCGC GCTACTGGGT GATCGGGACG
ACCGACACCC CCTGGGACCT GGACCCGACC CACCCGGTCG CGACCGCAGC GGACATCGAC
TACGTGCTCG ACCACGCGAA CGCCGTCCTC GCGGACCCGC TCACGCGCGA CGACATCATC
GGCACGTGGG CCGGCCTGCG CCCGCTGCTG CAGCCCGGCA CCAAGGAGGG GACGTCGTCG
GCGAAGGTCT CCCGGGAGCA CACGGTGGCC TCGCCCGCGC CCGGGCTGAC GGCGATCGCC
GGCGGCAAGC TCACGACGTA CCGCGTGATG GCGAAGGACG CCGTCGACTT CGCGCTCGGG
GAACGGGCTC GCCACCTGCC CTCGATCACG GAGCGGATCC CGCTGATCGG GGCCGTCGGC
CTGCAGGCGA TGCGACGGCG GTCGCGCGCT CTCGCGAACG AGCACGGCTG GACCAAGGAG
ATGGTCGCCC ATCTCCTGCA CCGGTACGGC TCCGGGATCA GCGATCTGCT CGAGTCGATC
GCCGACCAGC CCGATCTCGC CCGCCCGCTC GAGCACGCCC CGGCGTACCT GCGCGCCGAG
ATCGCGTTCG CGGCGACCCA CGAGCAGGTG CTGCACCTCG AGGACGTCCT CCTGCACCGC
ACGCGCCTCA ACTACGAGGT CGCCGACCGC GGGCGTGCGG CGCTGCCCGA GATCGCCGAG
GTCATCTCGC CGATCCTCGG GTGGGACGAC GAACGCCGCG CCGCAGAGAT CGCCGCCTAC
ACCGCCCGCG CGGACGCCGA GGACGCCGCC GAGAAGACCT GGTCCGACGC CGACGGGGAG
CGCGTCCGGC TCGGCGCAGG CGACGTGGCC CCGATGATCT CTCTCGACGC GCCTTCGACC
ACGAGGTGA
 
Protein sequence
MTASTVTGQT RLEALARMSS DEPLDVLVIG GGVTGAGIAL DAVTRGLRTG IVEAQDWASG 
TSSRSSKLVH GGLRYLQMLD FHLVHEALTE RDLLITQLAP HLVKPVSFLY PLEHRVWERA
YVGAGVALYD TLASINGRRR ALPLHRHVTR SGMERLFPDL RHDAAIGAVR YWDASVDDAR
LVITLIRTAA SYGALAASRT QVVSLTKSGI GRVDGAIVAD LETGEQHTIR ATHVVNATGV
WTEKTEALAG TEGGLRVLAS KGIHIVVPRE RIKGEVGLIL QTEKSVLFVI PWSRYWVIGT
TDTPWDLDPT HPVATAADID YVLDHANAVL ADPLTRDDII GTWAGLRPLL QPGTKEGTSS
AKVSREHTVA SPAPGLTAIA GGKLTTYRVM AKDAVDFALG ERARHLPSIT ERIPLIGAVG
LQAMRRRSRA LANEHGWTKE MVAHLLHRYG SGISDLLESI ADQPDLARPL EHAPAYLRAE
IAFAATHEQV LHLEDVLLHR TRLNYEVADR GRAALPEIAE VISPILGWDD ERRAAEIAAY
TARADAEDAA EKTWSDADGE RVRLGAGDVA PMISLDAPST TR