| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3251 |
|---|
| Symbol | |
|---|
| ID | 7861723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3607764 |
|---|
| End bp | 3608819 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643867351 |
|---|
| Product | cytochrome c-type biogenesis protein CcsB |
|---|
| Protein accession | YP_002883256 |
|---|
| Protein GI | 229821730 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.165529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.248135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC TGGGCGACCT CAGCCTGCTC CTCATCACGG GCGCCATGAC GGCGTACCTG
GTGGCGATGA TCGCGTTCGC GATCGACCTC TCCCGCCTGC GGTCCGGCGT CGAGGACGCC
CGGCCCCGCA AGGCGGCGGG GATCGCGATG GCCACGATGT GGCTCGGGGC GATCTTCCAC
CTCGCCGGCC TCCTGACCCG CGGGCTCGCC GCCGGCCGGG TGCCCTGGGC GAACATGTAC
GAGTTCACGA TCTCCTCGAC GTTCGTCGCC GTCGCCGTCT TCCTCGCGGT GCAGCGGCGT
CGCGACATCC GCTACCTCGG GACGTTCGTG GCCCTGGTGT CGGTGCTCTC GCTGTTCCTC
GCGCTGTCGG TGCTGTACGT CGCGCCCGAC GGCGTCATGC CGGCGCTCCA GAGCTACTGG
CTCGTGATCC ACGTGTCGAT CGCCGCTGCG GCGGTCGGCG TCTTCGCGCT GGCCGCGGTG
GCGTCGGGCC TGCAGCTCGC GAAGGACGTC TCCGACACGC GAGCGTCGGC ACGGGCGGCA
GCACCCGTCG CGGCCGACGA GCCGGCCGTG GCGCTCGCGG GGGCGACGTC GGTCACCACC
AGCTCCGCAC GGGTCGACGG GCGGCCCGGC CGCAACGCGA CTGCCGGGCG CGGTGGCCAG
GCGGCTCGCG GCGCCACGGG GGCCCCCGCG GCGCGGCCGA CCCGTGGCGG GACCGTCGCC
CGGCGGGTGC TCGCCTCGCT CCCGTCCGCC GACGACCTCG AGCGGTTCTC CTACCGGCTC
AACGCCGTCG GCTTCATCCT GTGGACGTTC ACGCTGATCG CCGGGGCGAT CTGGGCCGAG
CACGCCTGGG GTCGGTACTG GGGCTGGGAC GCGAAGGAGG TCTGGACGTT CGTCGTCTGG
GTCGTCTACG CGGCGTACCT GCACGCGCGC AGCACCCGTG GCTGGGAGGG GCGCCGTGCC
GCGTACTTCT CCCTCGCCGG GTTCGCGTCG ATCCTCATCA ACTACTACGT GGTGAACTTC
TTCTTCACGA GCCTGCACAC GTACTCGGGC GTCTGA
|
|---|
| Protein sequence | MTDLGDLSLL LITGAMTAYL VAMIAFAIDL SRLRSGVEDA RPRKAAGIAM ATMWLGAIFH
LAGLLTRGLA AGRVPWANMY EFTISSTFVA VAVFLAVQRR RDIRYLGTFV ALVSVLSLFL
ALSVLYVAPD GVMPALQSYW LVIHVSIAAA AVGVFALAAV ASGLQLAKDV SDTRASARAA
APVAADEPAV ALAGATSVTT SSARVDGRPG RNATAGRGGQ AARGATGAPA ARPTRGGTVA
RRVLASLPSA DDLERFSYRL NAVGFILWTF TLIAGAIWAE HAWGRYWGWD AKEVWTFVVW
VVYAAYLHAR STRGWEGRRA AYFSLAGFAS ILINYYVVNF FFTSLHTYSG V
|
|---|
| |