| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3235 |
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| Symbol | |
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| ID | 7861591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3592957 |
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| End bp | 3594759 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 643867336 |
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| Product | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_002883241 |
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| Protein GI | 229821715 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.49226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.038874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCC CGGCGGGAGG CGAGAACGCG TCGACGCGCA CGGCGCGGGA GCTCGTCGAG
GCGCTCGTCG AGCACGGCGT GCGGCACGCC GTCCTGGCGC CGGGCTCGCG CAGCGCGCCG
CTCGCGTACG CCCTGCTGGT CGCGGAACGC GCCGGGCGCC TCGCGCTGCA CGTGCGCATC
GACGAGCGCA GCGCCGGCTT CGTCGCGCTC GGGATCGCGA AGGCGTCGGG GAAGCCGGCG
GTGGTGGTGA CGACGTCGGG CACGGCGGTC GCGAACCTGC ACCCAGCGGT GCTCGAGGCC
GGGCACGCGC GCGTGCCGCT GCTCGTGCTC TCGGCGGACC GGCCCCTCGA GCTGCGCGGG
ACCGGCGCCA ACCAGACCAC CGACCAGGTC GACCTGTTCG GGGTCGGCAC GGACGTCTCG
CGGCCGCGGT GGAGCGTCGA CATGCCGGCT CCGGGTGGGT CCGAGCCGGC CGAGCCCGGC
GAGCCCGGGC ACGAGCCGGA CGTGCGGGAC GTCGTCGCGC GGGCGGTGGC GGCGGCTCGC
GGCGTTCCCG GCGCGGCGTC CGCGCGGGAG CTCGACGGCG TTCCGGGGGC GGTGCACGTC
AACGTCGCCT TCCGGGAGCC GCTCGTGCCG GACCTGCCGC TGGCGGGCGG GGAGCGGCCG
GCCCCCGTGC CGACGGAGCC TTCCGCGTCG GTGCCGGTGT CGGCCGATGC GTCGGCGTCG
GCGCACTTCT CGGCGAGGGC GGTGCCCGGT GCCGGGTCCG GCACGATCGT GATCGCTGGC
GACGCCGCCG GCCCTGCCGC CCGCCGGCTG GCCGAGGCCG CGGGCCTGCC GCTGCTCGCG
GAACCGTCGT CCGGGGCGCG CGGCGGCCCG AACGCCGTCG TCAGCCCGGC ACAGCTCCTC
GGCGTACCGG GACTCGGTGA CGCCGTCCGG CGCGTCGTCG TCCTCGGCCG GCCGACGCTC
TCCCGGCCGG TGTCGCGGCT GCTGGGGCGG GCGGACGTCG AGGTCGTCGT GGCCGACCCC
GCGGGGATGC CGTGGCTCGC GCCACCCCGG GCGCTCCACG TGCCGGCTGA CGCTCTCGCG
CTCGAGCCCG GCGACCCGGC GTGGCTGGCG CGGTGGGGTG CCGCGTCCGA CGCCGCCGGT
CTCGTGCTCG ACGACGTCGC CGCTCGCGCC GCCCTCACCG GGCCGGGGGT GGCCCGCCTC
GTGGCCGCCG CTGCCGCGCG GTCCGGCGAC GTGCTGCTCG CCGGGTCGTC GATGGCCGTG
CGTCACCTCG ACACGGCCGC CGCGCCGTCG GACGCCCAGA TCCTCGCCAA CCGCGGGCTC
GCGGGGATCG ACGGGACGGT GTCGACCGCC GTCGGCCTCG CGATCGCAAC ACGCCCCGGT
ACGACGGTGC GTGCGCTGCT CGGCGACCTC ACCCTGCTGC ACGACGCCGG CGGACTCGCC
CGCGGGCCGC TCGAGCGGGA GGTCGCGGTG CAGCTCGTGG TCCTGCACGA CGACGGCGGC
GCGATCTTCG CGACCCTCGA GCAGGGTGAG CAGCGCCTCG CGGGGGAGTT CGAGCGGGTC
TTCGGCACGC CGCAGGGCGT CGACCTGGCG GCGCTCGCGG CCGCGTACGG CGTCGAGCAC
GTGCGTGTGG AGGACAGGCG TGCGCTGGAG TCCGCGCTGC GTGCCCCGGC GCCCGGGCGG
AGCCTCGTCG AGGTGCCCGT GGCGCGGGAT CAGGTGCGCG CCGACGTCCA GGAGCTCGAC
GCGCGGATCG TCGCGGCGGC GACAGCTGCC CTGTCGCGCA GTGGGCGCGC TCCACAGCCC
TGA
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| Protein sequence | MSAPAGGENA STRTARELVE ALVEHGVRHA VLAPGSRSAP LAYALLVAER AGRLALHVRI
DERSAGFVAL GIAKASGKPA VVVTTSGTAV ANLHPAVLEA GHARVPLLVL SADRPLELRG
TGANQTTDQV DLFGVGTDVS RPRWSVDMPA PGGSEPAEPG EPGHEPDVRD VVARAVAAAR
GVPGAASARE LDGVPGAVHV NVAFREPLVP DLPLAGGERP APVPTEPSAS VPVSADASAS
AHFSARAVPG AGSGTIVIAG DAAGPAARRL AEAAGLPLLA EPSSGARGGP NAVVSPAQLL
GVPGLGDAVR RVVVLGRPTL SRPVSRLLGR ADVEVVVADP AGMPWLAPPR ALHVPADALA
LEPGDPAWLA RWGAASDAAG LVLDDVAARA ALTGPGVARL VAAAAARSGD VLLAGSSMAV
RHLDTAAAPS DAQILANRGL AGIDGTVSTA VGLAIATRPG TTVRALLGDL TLLHDAGGLA
RGPLEREVAV QLVVLHDDGG AIFATLEQGE QRLAGEFERV FGTPQGVDLA ALAAAYGVEH
VRVEDRRALE SALRAPAPGR SLVEVPVARD QVRADVQELD ARIVAAATAA LSRSGRAPQP
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