| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3227 |
|---|
| Symbol | |
|---|
| ID | 7857984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3585327 |
|---|
| End bp | 3586049 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643867328 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_002883233 |
|---|
| Protein GI | 229821707 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.754321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0249404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATC TGCCTCAGGA ACCGAACACG GAGGTCGGGG AGCCGGCCGA GGTTCGCCGT
CGTCTCGACG TCGTGGCCAC CGGCCGCGGC ATGTTCGGCG CCCAAGACAC GGGCGACACG
TCCGGCTACG GCGGCCTCGT CCGCACGGTC ATCACGGCGA CGCCGGCCGA GCGCCCCTAC
GGTTCCTACT TCGACGAGGT CGTCGACATC CTCACCGAGG TGCTCGACGA AGCCGGCGTG
GCGTTCGACG ACGCCGTCGA GAAGGTCGTC GTCGACCGTG ACGAGCTCAC GCTCGACGTC
CGCCGTGAGC ACCTGGTGCT GGTGGCTCTG TCGTTGCGGG ACGACCCCGA CCTGCGGTTC
GACCTCAGCC TCGGCGTCAG CGGCGTGCAC TACCCGGCCG ACACCGGCCG TGAGCTGCAC
GCCGTGTACC ACCTGCACTC GATCACCCAC AACCGCAGGC TGCGGCTCGA GGTGGCGGTG
CCCGACGCCG ACCCGCACGT CCCGTCGACC ACCGCCGTCT ACCCGGCGAA CGACTGGCAC
GAGCGCGAGA CGTGGGACTT CTTCGGGATC GTCTTCGACG GTCACCCGGC GCTCGCGCGC
ATCGAGATGC CCGACGACTG GGTGGGACAC CCGCAGCGCA AGGACTACCC GCTCGGCGGG
ATCCCGGTCG AGTACAAGGG CGCGACGATC CCGCCCCCCG ACGAGCGGAG GGAGTACCGC
TGA
|
|---|
| Protein sequence | MSDLPQEPNT EVGEPAEVRR RLDVVATGRG MFGAQDTGDT SGYGGLVRTV ITATPAERPY
GSYFDEVVDI LTEVLDEAGV AFDDAVEKVV VDRDELTLDV RREHLVLVAL SLRDDPDLRF
DLSLGVSGVH YPADTGRELH AVYHLHSITH NRRLRLEVAV PDADPHVPST TAVYPANDWH
ERETWDFFGI VFDGHPALAR IEMPDDWVGH PQRKDYPLGG IPVEYKGATI PPPDERREYR
|
|---|
| |