Gene Bcav_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3188 
Symbol 
ID7857945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3542699 
End bp3543202 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID643867289 
Productprotein of unknown function DUF520 
Protein accessionYP_002883194 
Protein GI229821668 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.171819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0244342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCG ACTCCTCGTT CGACATCGTC AGCAAGCTCG ATCGGCAGGA GGTCGACAAC 
GCGCTCAACC AGGCGGCGAA GGAGATCTCG CAGCGGTACG ACTTCCGCGG CGTCGGCGCG
TCGATCACCT GGAGCGGCGA CGACGCGATC GTCATGGTCG CGAACTCCGC CGAGCGGGTC
CTCGCCGTCC TGGACGTGTT CCAGACCAAG CTCGTCAAGC GCGGCGTGTC CCTCAAGGCG
ATCGACACGG GCGACGACGA GCCGAAGCCC TCCGGCAAGG AGTACCGCCT CGCGGCGAGC
CTCAAGGAAG GGCTCAGCCA GGAGAACGCC AAGAAGATCA CCAAGCTCAT CCGCGACGAG
GGCCCGAAGG GCGTCAAGAC GCAGATCACC GGTGACGAGG TGCGGGCGAG CTCGAAGAGC
CGCGACGACC TCCAGGAGGT CATCGCCCTG CTCAAGGGCG CCGACGACAT CGACGCCGCC
CTGCAGTTCG TCAACTACCG GTAG
 
Protein sequence
MASDSSFDIV SKLDRQEVDN ALNQAAKEIS QRYDFRGVGA SITWSGDDAI VMVANSAERV 
LAVLDVFQTK LVKRGVSLKA IDTGDDEPKP SGKEYRLAAS LKEGLSQENA KKITKLIRDE
GPKGVKTQIT GDEVRASSKS RDDLQEVIAL LKGADDIDAA LQFVNYR