Gene Bcav_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3162 
Symbol 
ID7859446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3517400 
End bp3518179 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID643867259 
ProductNusG antitermination factor 
Protein accessionYP_002883168 
Protein GI229821642 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.441346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.204879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGT CCACAACAGG GCCCACCACC GGTGAGTCCC TCGACGACGC TGCCGCGACC 
CCGGTCGCGG AGGCCGGCGT CGATGTGGCC GAGCCCACCC CGGCCGAGCC CACCTCCGAC
GAGCCCACCT CCGACGAGCC CGCAGCGGAC GACGCAGCAG AGGCAGAGGT CGAGGTCGAG
GAAGACCCGC TGACGGCGTT CCGTCGCGAG CTCCAGGCGC AGCCGGGCGA CTGGTACGTC
GTGCACTCCT ACGCGGGCTA CGAGAAGCGC GTGAAGGCGA ACCTCGAGAG CCGGACGCAG
AGCCTCAACA TGGAGGAGTA CATCTTCCAG GTCGAGGTCC CGGAGGAGGA CGTCGTCGAG
ATCAAGAACG CGCAGCGCAA GGTGGTCCGC CGCGTGCGGA TCCCCGGCTA CGTGCTGGTG
CGGATGGACC TCACCGACGA GTCGTGGGGC GCGGTGCGGC ACACGCCCGG CGTCACCGGC
TTCGTGGGTC ACACCCACCA GCCCGTGCCG CTGACGACGT CGGAGGTCGT CTCGATGCTG
GCCCCGACGC TCGAGGCGAA GGCGCCCGCC ACCAAGCCGG GTGCCGCTCC GGCCGCCGCG
CCGATCGAGG TCGAGTTCAC CGTCGGTGAG TCCGTCACGG TCACGGACGG CCCGTTCGAC
ACACTCCCGG CGACGATCTC CGAGATCGCC CCGGAGTCGC AGAAGCTCAA GGTCCTCGTC
TCCATCTTCG GCCGGGAGAC CCCGGTCGAG CTGTCGTTCA ACCAGGTCGC CAAGATCTGA
 
Protein sequence
MSESTTGPTT GESLDDAAAT PVAEAGVDVA EPTPAEPTSD EPTSDEPAAD DAAEAEVEVE 
EDPLTAFRRE LQAQPGDWYV VHSYAGYEKR VKANLESRTQ SLNMEEYIFQ VEVPEEDVVE
IKNAQRKVVR RVRIPGYVLV RMDLTDESWG AVRHTPGVTG FVGHTHQPVP LTTSEVVSML
APTLEAKAPA TKPGAAPAAA PIEVEFTVGE SVTVTDGPFD TLPATISEIA PESQKLKVLV
SIFGRETPVE LSFNQVAKI