Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3162 |
Symbol | |
ID | 7859446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3517400 |
End bp | 3518179 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643867259 |
Product | NusG antitermination factor |
Protein accession | YP_002883168 |
Protein GI | 229821642 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.441346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.204879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGAGT CCACAACAGG GCCCACCACC GGTGAGTCCC TCGACGACGC TGCCGCGACC CCGGTCGCGG AGGCCGGCGT CGATGTGGCC GAGCCCACCC CGGCCGAGCC CACCTCCGAC GAGCCCACCT CCGACGAGCC CGCAGCGGAC GACGCAGCAG AGGCAGAGGT CGAGGTCGAG GAAGACCCGC TGACGGCGTT CCGTCGCGAG CTCCAGGCGC AGCCGGGCGA CTGGTACGTC GTGCACTCCT ACGCGGGCTA CGAGAAGCGC GTGAAGGCGA ACCTCGAGAG CCGGACGCAG AGCCTCAACA TGGAGGAGTA CATCTTCCAG GTCGAGGTCC CGGAGGAGGA CGTCGTCGAG ATCAAGAACG CGCAGCGCAA GGTGGTCCGC CGCGTGCGGA TCCCCGGCTA CGTGCTGGTG CGGATGGACC TCACCGACGA GTCGTGGGGC GCGGTGCGGC ACACGCCCGG CGTCACCGGC TTCGTGGGTC ACACCCACCA GCCCGTGCCG CTGACGACGT CGGAGGTCGT CTCGATGCTG GCCCCGACGC TCGAGGCGAA GGCGCCCGCC ACCAAGCCGG GTGCCGCTCC GGCCGCCGCG CCGATCGAGG TCGAGTTCAC CGTCGGTGAG TCCGTCACGG TCACGGACGG CCCGTTCGAC ACACTCCCGG CGACGATCTC CGAGATCGCC CCGGAGTCGC AGAAGCTCAA GGTCCTCGTC TCCATCTTCG GCCGGGAGAC CCCGGTCGAG CTGTCGTTCA ACCAGGTCGC CAAGATCTGA
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Protein sequence | MSESTTGPTT GESLDDAAAT PVAEAGVDVA EPTPAEPTSD EPTSDEPAAD DAAEAEVEVE EDPLTAFRRE LQAQPGDWYV VHSYAGYEKR VKANLESRTQ SLNMEEYIFQ VEVPEEDVVE IKNAQRKVVR RVRIPGYVLV RMDLTDESWG AVRHTPGVTG FVGHTHQPVP LTTSEVVSML APTLEAKAPA TKPGAAPAAA PIEVEFTVGE SVTVTDGPFD TLPATISEIA PESQKLKVLV SIFGRETPVE LSFNQVAKI
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