Gene Bcav_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3153 
Symbol 
ID7859437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3504776 
End bp3505747 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID643867250 
ProductABC transporter related 
Protein accessionYP_002883159 
Protein GI229821633 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG CCATCATCTC CGCGCGCGGC CTCGGCCGCG ACTTCGTCGT GCGGTCCGGC 
CGTGGCCTGC GCCGCACGCG CCGGGTGGTC GAGGCCGTGC ACGACCTCAC GCTCGACGTG
GCCGACGGCG CCGCGATCGG CTACCTCGGC GCGAACGGCG CCGGGAAGTC GACGACGATC
AAGATGATCA CCGGGATCCT CGTGCCGACG GCGGGCACGA TCCGCACGTG CGGCCGGGAC
CCGCACCGGG AGCGCCGCGC CCTCGCCCGC GAGATCGGCG TCGTGTTCGG GCAGCGCTCC
CAGCTGTGGT GGGACCTGCC GCTCGCCGAG TCCTACCGTG CGCTCGGCGC GATCCACGGT
CTCGCACCTC AGGCGCTGCG ACGGCGCACC GACGAGCTCG TCGGCCGCCT CGACCTCGGC
TCCTTCCTCG ACACCGCGGT GCGCCAGCTG AGCCTCGGGC AGCGGATCCG CGGCGAGATC
GCCGCCGCGC TGCTGCACGA CCCGCGGCTC CTCGTGCTCG ACGAGCCGAC CATCGGCCTC
GACGTGCTCA GCAAGGAGCG GCTGCGCGAG TTCCTCGTGG AGCGCCGCGC GGAGCACGGC
ACGACCCTGC TCCTCACGAC GCACGACATG GACGACGTCC AGCGCCTCAC GGAGCGGATC
GTCGTCGTCG ACCACGGCCG GTGCATCTTC GACGGCACCC TGCCCGGGCT CGTGCAGCGC
GTCGGCGCCG ACCGCGTGCT CGTGCTCGAC CTGCTCACGC CCACCCGCCC GCTCGACGAC
ATCCCGGGCA CGCAGCTCGT CGGCACGGAG TCCGACGGCC TGCGGCAACG CCTGGCGTTC
TCCCCCGACG CGACCAGCGC CGTCGACGTC CTCACCGCCG TCACGCCGCG GGCCGCCGTC
CGTGACCTCT CGATCGAGGA GCCCGACATC GAGGACGTCG TCCGGCGGCT CTACCTCTCG
GCCGGCGGCT GA
 
Protein sequence
MTEAIISARG LGRDFVVRSG RGLRRTRRVV EAVHDLTLDV ADGAAIGYLG ANGAGKSTTI 
KMITGILVPT AGTIRTCGRD PHRERRALAR EIGVVFGQRS QLWWDLPLAE SYRALGAIHG
LAPQALRRRT DELVGRLDLG SFLDTAVRQL SLGQRIRGEI AAALLHDPRL LVLDEPTIGL
DVLSKERLRE FLVERRAEHG TTLLLTTHDM DDVQRLTERI VVVDHGRCIF DGTLPGLVQR
VGADRVLVLD LLTPTRPLDD IPGTQLVGTE SDGLRQRLAF SPDATSAVDV LTAVTPRAAV
RDLSIEEPDI EDVVRRLYLS AGG