| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3123 |
|---|
| Symbol | |
|---|
| ID | 7859407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3484286 |
|---|
| End bp | 3485596 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643867220 |
|---|
| Product | preprotein translocase, SecY subunit |
|---|
| Protein accession | YP_002883129 |
|---|
| Protein GI | 229821603 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAGCG CATTCGCCCG GGCGTTCCGG ACGCCCGACC TGCGGCGCAA GCTGCTCTTC
ACGCTCGGGA TCATGGCGAT CTTCCGCCTC GGGTCCTTCA TCCCGACCCC CGGCATCGAC
TACGCGAACG TGCAGGTCTG TGCCGCGGCC TCGCAGGACA ACGACGTCCT CGGCCTCATC
AACCTGTTCA GCGGCGGTGC GCTGCTCCAG CTGTCGATCT TCGCGCTCGG GATCATGCCG
TACATCACGG CGAGCATCAT CATCCAGCTG CTCCGTGTGG TGATCCCTCG TTTCGAGGCC
CTCCACAAGG AGGGGCAGTC CGGCACCGCG AAGCTCACGC AGTACACCCG TTACCTCACG
ATCTTCCTCG CGGTGCTGCA GGCCACGACG ATCATCACGA CGGCGCGCAC CGGCGTGCTG
TTCAACGGGT GCGGGGCGTC CGACTCGAAC ACGCCGCTCA TCCCGAACGA CGGCGTCACC
ACGATCCTGC TGATGATCGT GACGATGACG GCGGGTACCG GGCTCATCAT GTGGCTCGGC
GAGCTCATCA CGGAGCGCGG CGTCGGCAAC GGCATGTCGC TGCTCATCTT CACGTCGATC
GCGGCGAGCT TCCCGACCGC GCTGTGGGCA GTCGCCACGG GCGAGGGCGG CGCCACGAAG
TTCGGCCTCG TGCTGCTGCT CACCCTCGTG ATCGTGGTGC TCGTCGTGTT CGTCGAGCAG
TCACAGCGTC GCGTCCCGGT GCAGTACGCG AAGCGGATGG TCGGGCGTCG CATGTACGGC
GGCTCGAGCA CGTACATCCC GATCAAGATC AACATGTCCG GCGTGATCCC GGTGATCTTC
GCGTCGTCGC TGCTCGCGCT GCCGACGCTC GCCGCCCAGT TCGGGGACCC GACCGAGGGC
TGGGTCCAGT GGGTCCAGGC GAACCTCGTC GATCCGGGTG CGCCGATGTA CCTCGCGATC
TACGTGGTGC TCATCCTGTT CTTCGCGTTC TTCTACACGT CGATCACGTT CAACCCGGAC
GAGGTCGCCG ACAACATGAA GCGCTACGGC GGGTTCATCC CGGGCATCCG GGCGGGCCGG
CCGACGGCCG AGTACCTGCA CTACGTGATC ACGCGCATCA CCTCGGCCGG CGCGATCTAC
CTCGCGCTCG TCGCGATGGT GCCGACGATC GCGTTCGTGC TCCTGGGGAT CTCCACGTCG
ATCCCGTTCG GCGGGACGTC GCTGCTGATC GTCGTCAGCG TCGGGCTCGA GACCGTCAAG
CAGATCGACT CCCAGCTCCA GCAACGACAC TACGAGGGCT TCCTGCGATG A
|
|---|
| Protein sequence | MLSAFARAFR TPDLRRKLLF TLGIMAIFRL GSFIPTPGID YANVQVCAAA SQDNDVLGLI
NLFSGGALLQ LSIFALGIMP YITASIIIQL LRVVIPRFEA LHKEGQSGTA KLTQYTRYLT
IFLAVLQATT IITTARTGVL FNGCGASDSN TPLIPNDGVT TILLMIVTMT AGTGLIMWLG
ELITERGVGN GMSLLIFTSI AASFPTALWA VATGEGGATK FGLVLLLTLV IVVLVVFVEQ
SQRRVPVQYA KRMVGRRMYG GSSTYIPIKI NMSGVIPVIF ASSLLALPTL AAQFGDPTEG
WVQWVQANLV DPGAPMYLAI YVVLILFFAF FYTSITFNPD EVADNMKRYG GFIPGIRAGR
PTAEYLHYVI TRITSAGAIY LALVAMVPTI AFVLLGISTS IPFGGTSLLI VVSVGLETVK
QIDSQLQQRH YEGFLR
|
|---|
| |