Gene Bcav_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3119 
Symbol 
ID7859403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3478664 
End bp3480067 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content75% 
IMG OID643867216 
Productexopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 
Protein accessionYP_002883125 
Protein GI229821599 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC TGGCCGACCG CCTCGGTGCG TCGGGCGTGC GCGTCGCCGG CGTGGCTGCC 
CCGGTGACGT GGCCGCAGGC CCAGGGCGTC TACCGTCGGA TCGCCGCCGG GGGTGATGCC
CTCATCGCCT TCGCGCTCGT GGGCTCGGTC GCCGTCGCCG GGTGGGGGAG CGACCGCACG
GTCCTCGCCG GAGCCGTCGC CGCCGCGCTG TTCGTCGTCG CCGTCGCCGC CTGCGGTGGC
TACTCGCGCG AGTCGCTGGC CACGGGACGG CGCGAGCTGC TCGCCCCGGT CAAGGCGGGC
GCGGCGGTGG CCGCCCTCGG ACTCGTCGTC GACTACGCCG GGACCGACGT CCCGCCTGTC
CTGCTGCTCG TCGCACTGCC CCTCGTCGTC GCGACTGTCC TCGCGGCGCG GTCCACGCAG
CGGGCGGTCG TGCGTCGGCT ACGCCGCGAG GGCGCACTGC TGCGCCGGGT CCTCGTCGTC
GGGAGCGACG GCGCCGCGGT CGCGCGGGTC GTCTCGGCGT TCGACGCCGC CCGGGCCGAC
GGCGCTGTGG TCGTCGCGAC CCTCTGGACC CCGTCCCGCC CGCTCACCGA CGTGCCGGAG
CTCGTCGTCG AACGCGGGGT CGACGTCGTG GTGGTCGCCG GCGACGTCGG CGAGACCGAG
CTGCGGCGGA TGTCCTGGGA GCTCGAGCGC ACCGCCGCCC AGCTCGTCCT CGTCCCCGAG
CTCGCCGATC TGGCGGCACC GCGACTGCGC CTCGGACGGG TCGCCACCCT GCCGGCGCTC
GAGGTCGACC TCGGCGCCCG GCCCGCGCGG CGACGGTCGA AGGTGTGGTT CGACCGGGTC
GTCGGGGTCG TCCTGCTCGC CGCGGCGTCG GTCGTGCTCG TCCCGGCCGC GCTGGCGGTG
CGCCTGACCT CACGGGGTGC GGTCATCTTC CGCCAGCAGC GCGTCGGAGA GCGCGGCCGC
ACCTTCACGA TGCTCAAGCT GCGCACGATG GTGGCGGACG CCGAGGCCCG GCGGAGCGAG
CTCGAGACCA GCAGCGAGGC CGACGGCCCG CTGTTCAAGA TGCGGCGCGA CCCACGGCTC
ACGCGCGTGG GGCGCGTCCT GCGGCGCTTC TCCATCGACG AGCTGCCCCA GCTCGTGAAC
GTGGTCCGCG GCGACATGTC CCTCGTCGGG CCGCGGCCGC CGCTGCCGTC CGAGGTTGCC
CGCTATGACG CCACGACCTC GCGCCGGATG CACGCGCGGC CGGGCCTCAC CGGACTCTGG
CAGGTCAGCG GGCGGAGCGA TCTCGCCTGG GAGCAGTCCG TGCGGCTCGA TCTCCAGTAC
GTCGACAGGG CGACCACCTG GACCGACCTG CGTATTCTCG CCTCCACGGT CGGAGCGGTG
ATCGGAGGTC GCGGTGCGTA CTGA
 
Protein sequence
MSLLADRLGA SGVRVAGVAA PVTWPQAQGV YRRIAAGGDA LIAFALVGSV AVAGWGSDRT 
VLAGAVAAAL FVVAVAACGG YSRESLATGR RELLAPVKAG AAVAALGLVV DYAGTDVPPV
LLLVALPLVV ATVLAARSTQ RAVVRRLRRE GALLRRVLVV GSDGAAVARV VSAFDAARAD
GAVVVATLWT PSRPLTDVPE LVVERGVDVV VVAGDVGETE LRRMSWELER TAAQLVLVPE
LADLAAPRLR LGRVATLPAL EVDLGARPAR RRSKVWFDRV VGVVLLAAAS VVLVPAALAV
RLTSRGAVIF RQQRVGERGR TFTMLKLRTM VADAEARRSE LETSSEADGP LFKMRRDPRL
TRVGRVLRRF SIDELPQLVN VVRGDMSLVG PRPPLPSEVA RYDATTSRRM HARPGLTGLW
QVSGRSDLAW EQSVRLDLQY VDRATTWTDL RILASTVGAV IGGRGAY