Gene Bcav_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3117 
Symbol 
ID7859401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3477229 
End bp3477450 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content62% 
IMG OID643867214 
Producttranslation initiation factor IF-1 
Protein accessionYP_002883123 
Protein GI229821597 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA AGGACGGTGT CATCGAGATC GAGGGCAGCG TGATCGAGGC TCTGCCGAAC 
GCGATGTTCC GCGTCGAGCT GAGCAACGGT CACAAGGTGC TCGCACACAT CTCGGGCAAG
ATGCGCCAGA ACTACATCCG CATCCTCCCC GAGGACCGGG TGGTCGTGGA GCTGACGCCG
TACGACCTCA CGCGCGGCCG CATCGTCTAC CGCTACAAGT AA
 
Protein sequence
MGKKDGVIEI EGSVIEALPN AMFRVELSNG HKVLAHISGK MRQNYIRILP EDRVVVELTP 
YDLTRGRIVY RYK