Gene Bcav_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3111 
Symbol 
ID7859395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3473502 
End bp3474278 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content76% 
IMG OID643867208 
Productputative hydrolase 
Protein accessionYP_002883117 
Protein GI229821591 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.995394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCAGG CAGCACGCGG GGCCCGGACC GGTTCGGTCC GGGCCCCGCG TGCGTCCGCG 
GACGGGCAGC GGCGGCCGGA CGTGCTCCTG GTGCACGGGA TCCGGACGTC GTCGACGATG
TGGCGTCACC AGCTGGAGGT CTTGAGGGCT CTGGGGTTCC GTGCCGAGGC ACTGGACCTG
CCGGGGCACG GTGCCCGACG CGGCGAGACG TTCACGCTCG ACGCCGCGCG CGAGTCGATC
GAGAGCGCGC GCTCGGGCAT GGCGGAGGAC GCCGTCGTCG TCGGCCTGTC GCTCGGCGGG
TACCTGGCGC TGGACTGGGC GGCCAGGACG ACGCACCCCG CGACGCGGCT CGTCGTGTCG
TCCTGCACGG CGCTCCCAGG GGGGTGGGGT CACCGCGCGT ACCTCGGCCT GTCGGACGTC
ATCGGCCGGC TCCCGGCCGA CGGCGCGACG CGGCTGAGCG ATGCCGCCGC GCGGGGTCTC
GTCGGACGGC GCGCCGCCGA GGACGTCGCC GCGGGAGGGG TGGCGGTCGA GGCTCAGCTC
GCGACGCTCC GCGCACTGCT CGCGGTGCGG CCGCTGGACG ACCTCGCCCG GATCGACGTG
CCGGTCACGT TCCTGCTCGG CGGCTGGGAC CACTTCCGCA CGGAGCAAAG CGCCTTCGAG
CGCGCGGCAC GGCGGGGCGA CGTCGTCGTC GTGCCACGCG CGACGCACCT CGTGAGCCTG
CACCGGCCGC TGGCGTACGA CCGCGCCCTG CTGGGGATCC TCGACCGCGA CCGGTGA
 
Protein sequence
MQQAARGART GSVRAPRASA DGQRRPDVLL VHGIRTSSTM WRHQLEVLRA LGFRAEALDL 
PGHGARRGET FTLDAARESI ESARSGMAED AVVVGLSLGG YLALDWAART THPATRLVVS
SCTALPGGWG HRAYLGLSDV IGRLPADGAT RLSDAAARGL VGRRAAEDVA AGGVAVEAQL
ATLRALLAVR PLDDLARIDV PVTFLLGGWD HFRTEQSAFE RAARRGDVVV VPRATHLVSL
HRPLAYDRAL LGILDRDR