Gene Bcav_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3068 
Symbol 
ID7858528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3420665 
End bp3421705 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content75% 
IMG OID643867165 
Productmetalloendopeptidase, glycoprotease family 
Protein accessionYP_002883074 
Protein GI229821548 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.642006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGGA TCGAGACGTC GTGCGACGAG ACGGGGCTCG CGCTCGTGCG CGGCCGCGAG 
CTGCTCGCCG ACGTCACCGC CTCCTCCATG GACTCCCACG CGCGGTTCGG CGGCATCGTC
CCGGAGATCG CCTCGCGCGC CCACCTCGAG GCCATAGAGC CGACGCTCGA CGCGGCGCTC
GGCCAGGCCG GGGTGGGCCT GTCGGACGTC GACGCGATCG CCGTCACCGC CGGGCCCGGC
CTGGTGGGCT CGCTCACCGT CGGCTCGGCC GCGGCCAAGG CCCTCGCGCT CGGGCTCGGC
GTCCCGCTGT ACGGCGTCAA CCACGTGGTC GGGCACGCGG CCGTCGACGA GCTCGTGCAC
GGCCCGTTCC CCGAGCGGTT CCTGGCGCTC GTCGTGTCCG GCGGCCACTC GAGCCTGCTC
ATGGTGCGCG ACATCGCACG TGACGTCGTC GAGCTCGGCC AGACCCTCGA CGACGCCGCC
GGCGAGGCTT TCGACAAGGT GGGGCGGATC CTCGGCCTGC CCTACCCGGG CGGACCGCAC
GTCGACCGCC TCGCCCGCGA GGGCGACCCG GACGCCATCG CGTTCCCGCG CGGACTCTCC
CGCGGCAAGG ACCTCGCGCG CCACCCGTAC GACTTCTCGT TCTCCGGCCT CAAGACCGCC
GTCGCGCGCT ATGTCGAGGC CCGCGAGGAC TCGGGCGCCG GAGTGCCCGT GGCCGACGTC
GCCGCCTCGT TCTCGGAGGC CGTCGCCGAC GTCCTGGTCA CCAAGACCAT CGCGGCGTGC
CGCGCCCACG AGGTCGACAC GCTCGTGATC GGCGGCGGCT TCTCCGCGAA CTCGCGGCTG
CGGGAGCTCG CCGCGGAACG CTGCGCCGCC GCCGGCGTGG ACGTGCGGAT CCCGCCGATC
CGCTACTGCA CCGACAACGG CGCCATGATC GCCGCGCTGG GCTCCGCCGT CGTCCGCTCC
GGCGTCGCCC CCTCCCCGCT GGACCTCGCG ACCGACTCCC AGATGCCTCT CGAGCAGGTC
GTCATGGGTG CCGTCGCCTG A
 
Protein sequence
MLGIETSCDE TGLALVRGRE LLADVTASSM DSHARFGGIV PEIASRAHLE AIEPTLDAAL 
GQAGVGLSDV DAIAVTAGPG LVGSLTVGSA AAKALALGLG VPLYGVNHVV GHAAVDELVH
GPFPERFLAL VVSGGHSSLL MVRDIARDVV ELGQTLDDAA GEAFDKVGRI LGLPYPGGPH
VDRLAREGDP DAIAFPRGLS RGKDLARHPY DFSFSGLKTA VARYVEARED SGAGVPVADV
AASFSEAVAD VLVTKTIAAC RAHEVDTLVI GGGFSANSRL RELAAERCAA AGVDVRIPPI
RYCTDNGAMI AALGSAVVRS GVAPSPLDLA TDSQMPLEQV VMGAVA