Gene Bcav_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3029 
Symbol 
ID7860140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3378935 
End bp3379852 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID643867126 
ProductABC transporter related 
Protein accessionYP_002883035 
Protein GI229821509 
COG category[R] General function prediction only 
COG ID[COG4152] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000334829 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGCGCT TGGACGGCAT CGACCGGTCC TTCGGGGACC GGCAGGTGCT CCACGACGTG 
TCCTTCACCG TCGAACGGGG CTTGCTGACG GGTTTCGTGG GCGGGAACGG CGCGGGCAAG
ACGACGACGA TGCGGATCAT CCTCGGGGTG CTCGCCGCGA ACGCGGGGTC GGTGACGCTC
GACGGCCGGC CGCTCGGCGG CGAGCAGCGG CGCACGTTCG GGTACATGCC CGAGGAGCGC
GGGCTCTACC CGAAGATGAA GGCCGCGGAA CAGCTCACCT ACCTCGCCCG CCTGCACGGG
TTCGAGCGGC ACGCGGCGGA GGACCAGGCG CGCGCGCTGC TGGACCGGCT CGGCCTGACC
GAACGGGCCG ACGACCCGCT CGAGTCGCTC TCGCTGGGAA ACCAGCAACG CGTGCAGATC
GCCGCGGCGC TCGTGCACGA CCCCGCCGTC CTCATCCTCG ACGAGCCGTT CTCCGGGCTG
GACCCGCTCG CCGTCGACGT CGTCGTGGCG GTGCTGGCCG AGCATGCCGA GCGCTGCGTC
CCCGTGCTGT TCTCCTCGCA CCAGCTCGAT CTCGTCGAGC GGCTGTGCGA CCGGCTCGTC
ATCATCTCGG GCGGACGCAT CCGGGCCGCC GGCTCCCGCG ACAGCCTGCG CGACCAGTTC
TCCGCGAGCC GGTACGAGCT CACCGCGGCG ACCGACGTCG GTTGGGTCCG AGGCGTGCCC
GGGGTCGAGG TCGTCGAGTT CGACGGCGGC TCCGCGCTCT TCGAGGCCGA CGACGCCGCA
GCCCAGCACG TGCTGCGCGC TGCCGTCGAG CGGGGTCCCG TCACGTCCTT CACGCCGATC
CGGCCCACGC TCGGCGAGAT CTTCCGCGAC GTCGTCACCG ACGAGTCGCC CGACAGCGAT
GAGAAGGGTG CCGCATGA
 
Protein sequence
MLRLDGIDRS FGDRQVLHDV SFTVERGLLT GFVGGNGAGK TTTMRIILGV LAANAGSVTL 
DGRPLGGEQR RTFGYMPEER GLYPKMKAAE QLTYLARLHG FERHAAEDQA RALLDRLGLT
ERADDPLESL SLGNQQRVQI AAALVHDPAV LILDEPFSGL DPLAVDVVVA VLAEHAERCV
PVLFSSHQLD LVERLCDRLV IISGGRIRAA GSRDSLRDQF SASRYELTAA TDVGWVRGVP
GVEVVEFDGG SALFEADDAA AQHVLRAAVE RGPVTSFTPI RPTLGEIFRD VVTDESPDSD
EKGAA