Gene Bcav_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2955 
Symbol 
ID7861374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3296727 
End bp3297896 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content74% 
IMG OID643867053 
Productribonuclease BN 
Protein accessionYP_002882962 
Protein GI229821436 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00451533 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000148448 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACCACCT CGGCCGATGC GACACCTCCC GCCCGGCGCT CCGGCCCGGC GGGCCTGGTC 
GACCGGGTCC AGGCGCTCGT CGCCTGGTTC CAGGGCACGC GCGCCGGTCG GACGCTCGCG
CGCTACGGCG CGGCGAAGGG TGGGCTGCTC GCCGGCGGGA TCGCCTACGC AGGGCTCTTC
TCCATCTTCT CCGCCCTGAC GATCGGGTTC ACCGTGTTCG TCGGGCTCCT GGGCGACGAC
GACGAGCTCT TCCAGGCGGT GCTCGACGCC CTGGACCGGG CTCTGCCGGG CATCGTGGAC
ACGGGCGACA GCTCCGGCGG TCTCCTCGAG CCGGAGCAGC TCGTGTCGAA CCCGGGGGTC
GGCGTCGCAG GCGTCGTGGC CGGCGTCGTC CTGCTCTTGT CGGCCCTGGC CGTGATGGGT
GCGCTCGGCA CGTCCATCCG CGCGATGTTC GGCCTCGCCA CCGCCCCGGG CAACGCGATC
CTCGCCCGCG TGCGCGACCT GGTGGGGTTC GTGGTCCTCG CACTCTCCGT CGTCGTCACC
GCGGCGCTCG GGATCGCCGC CGGGGTGGCG GGGTCATGGG TCGTCGACAC GCTGGGACTC
GACTCGAGCG TCGGGGCCGT CCTCGTCCGG GCGCTCGGCT ATCTGCTGGC GTTCGTCGTC
GACGCGTCCA TCTTCGTCAT GCTCATCCGC GTCCTCGCGG GCGCCCGGCC CCCACGCCGG
GACCTGCTCG TCGGTGCCTC GATCGGGGCG CTGGCCTCCG GCGTCATCCG GTTCCTCGGC
ACGGCGCTCG TCGGCGGGGC GACGGCGAAC CCGTTGCTCG CGTCGTTCGC CGCGCTCGTC
ACGCTGCTGC TCTGGGTGAA CCTCGTGGCC CGCGTGACGC TCTACGTCGC CGCGTGGACG
GCGAACCCGC CCGCGGTGCC GCCGGCACCG CCGCAGGAGC GCCTGCACCT CAAGGAGTCG
CCGAACTACG TGACGGTCAC CACGCCGGCC ACGCTCGACT GGGAGCACGA CGAACGCACC
GGCGTCGTCC AGTTCGCCGA GGCGAAGGAG CCCGAGCCGG AGTCGGACCA CTACTGGGGC
GGGTGGATCG GAGCATGGCG CGAGCGACGC CTGCGGCGGG TGCGGCGGCG GATCGAGAAG
CTCGAGCGGC GTGAGGCGCG GCTGCGCTGA
 
Protein sequence
MTTSADATPP ARRSGPAGLV DRVQALVAWF QGTRAGRTLA RYGAAKGGLL AGGIAYAGLF 
SIFSALTIGF TVFVGLLGDD DELFQAVLDA LDRALPGIVD TGDSSGGLLE PEQLVSNPGV
GVAGVVAGVV LLLSALAVMG ALGTSIRAMF GLATAPGNAI LARVRDLVGF VVLALSVVVT
AALGIAAGVA GSWVVDTLGL DSSVGAVLVR ALGYLLAFVV DASIFVMLIR VLAGARPPRR
DLLVGASIGA LASGVIRFLG TALVGGATAN PLLASFAALV TLLLWVNLVA RVTLYVAAWT
ANPPAVPPAP PQERLHLKES PNYVTVTTPA TLDWEHDERT GVVQFAEAKE PEPESDHYWG
GWIGAWRERR LRRVRRRIEK LERREARLR