Gene Bcav_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2873 
Symbol 
ID7860404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3207428 
End bp3208336 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content74% 
IMG OID643866970 
ProductDNA-formamidopyrimidine glycosylase 
Protein accessionYP_002882880 
Protein GI229821354 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0469723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGCA TGCCAGAGCT GCCGGAGGTC GACGCTCTCG GCGAGTTCCT GCGGGAACGC 
GTCGTGGGGC GCGAGATCGT CGCCGTCCAC ATCGCCCAGA TCGGCGCCCT GAAGACGTTC
GACCCGCCGC TCACCGACCT GGTCGGGCGC ACCGTCACCG GCGTGGAGCG GCACGGGAAG
TGGCTCGACC TCGCGCTCGG GCGGCGCGGC GATGCCGATG ACGGCGAACC GCACCTCGTC
TTCCACCTCG CCAAGGCGGG ATGGTTGCGC TGGAAGGACG AGATGCCGCC CGCGTCCACG
CCCGCGGGTC GTCCCATGGG CCGGCGCGCG GGGCCGCTCG CGCTGCGGGT GTGGCTCGAC
GACGGCGCCG GCTTCGACCT CACGGAGGCC GGCACGCGCA AGCGGCTCGC CGTGCACGTG
GTCGGCTCGC CGGAGGAGGT CGGACCGATC GCGAGCCTCG GCTTCGACCC TCGCTCCGAG
CTGACCGCCG AACGCCTGGG GGCGGCGCTG CGGACGCGCA ACCAGCAGCT GAAGGGCGCC
CTGCGGGACC AGACGCTGGT CGCCGGGATC GGCAACGCCT ACTCGGACGA GATCCTGCAC
GCGGCGCGGA TGTCCCCGTT CACGCTGACG AAGTCGCTGA CGGACGACGA CGTCGCTCGC
CTCACGGACG CGACCCGCCA GGTGCTCGAC GCCGCCGTCG CGGCCGCGAG CGGGAAGCCG
GCGGCCGAGC TCAAGGACGC GAAGCGCCGA GGCATGGCCG TCCACGGGCG GACCGGCGAG
ACGTGCCCGG TGTGCGGCGA CGTCGTCCGC GAGGTCTCCT TCGCGGACCG CAGCCTGCAG
TACTGCGCCA CGTGCCAGAC CGGCGGCGTG CCCCTGGCGG ACCGCAGGAT GTCGAAGCTC
CTGCGCTAG
 
Protein sequence
MGRMPELPEV DALGEFLRER VVGREIVAVH IAQIGALKTF DPPLTDLVGR TVTGVERHGK 
WLDLALGRRG DADDGEPHLV FHLAKAGWLR WKDEMPPAST PAGRPMGRRA GPLALRVWLD
DGAGFDLTEA GTRKRLAVHV VGSPEEVGPI ASLGFDPRSE LTAERLGAAL RTRNQQLKGA
LRDQTLVAGI GNAYSDEILH AARMSPFTLT KSLTDDDVAR LTDATRQVLD AAVAAASGKP
AAELKDAKRR GMAVHGRTGE TCPVCGDVVR EVSFADRSLQ YCATCQTGGV PLADRRMSKL
LR