Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2842 |
Symbol | |
ID | 7860373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3175092 |
End bp | 3176342 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643866939 |
Product | Glycerophosphodiester phosphodiesterase |
Protein accession | YP_002882849 |
Protein GI | 229821323 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0933431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGTTC GGACCACACG GGTGGCGCGA TGGGGCGTCC CGCTCGCAAC AGCTGCACTC GCGCTCGTCG GGAGCACCTC GGCCGCCGCA GCACCGACCA CCACGGAGCG CGGCGACGGC GGCGTCGAGA TCACGGGCCA CCGCGGCAGC GGCGGACTCA GCCCCGAGAA CACAGTGCCT TCGTTCCTCA TGGGCCGCGT GCAGGGCTCC GACTGGATCG AGATCGACGT CCAGCTGAGC GCCGACGACG TCCCGTTCCT GTTCCACGAC GCCACGCCGG CACGGACCAC CGACGTCGAG GACGTCTTCC CCGACCGCGC CACCGACCCG ATCACCTCGT TCACCTGGGA CGAGCTGCGC CGTCTCGACG CCGGGTCGTA CTTCGACGAC CTGTACACCG GCACGCGGAT ACCCGGCCTG CGCGACGCGG CCTGGATCGC CGGCGGCAGC TCCGGCATCA ACATCGAGCT CAAGTCGCCC GAGAACTCCC CCGGCGTCGA GCAGGTGCTC GCCGACGCCC TCGCCACCGA CCCGCTCTGG CAGCGCCTCG TCGACCGAGG CCTCGTGGTC GTCAGTTCCT TCGACGAGAC CTCGCTGCGC GCGTTCCACG AGCTCGCTCC GGCGGTCCCG GTGCTGCAGG TCGGTGCTGT GCCCGACGAC GCCACCCTCG CGGAGTGGGC GACCTGGGCG GACGGCGTCG TCACGAACTA CCGGCTGCTC GCGGACGCCG ACGTGGCGCG TGTCCAGGGC TTCGGGCTCG ACCTCAACGT GTACACGGTG AACGCGCCCG ACGCGATGCA GCGCATGATC GACCTGGGCG TCGACGGCAT CATCACCGAC TTCCCGGGGA CCCTGGCCCG CCTCGAGGCC GGACGCGACC CGCTGCCCCT GGCGAACGGC ATCGAGGTCG CCGAGGTCAA CGCGAACGTG CCGGGCGACG ACCTGCAGCC GGAGACCGGC GAGCACGTGG TGCTCACGAA CACGACCGAC GCGCCCGTCG ACGTCTCGGG ATGGACGCTC CAGGACGCCG TCATCAACCG GCTCGCGATC GGCGAGGGCT ACGTCATCCC GCCGGGAGGC ACGCTGCGCG TCTACACGGC CTCGGGCACG AACGCGCCCG ACGCCTACTA CAACGGCGGC ACGCGCACCG TCCTCAACAA CGACGGCGAC TCGATCGCCG TCATCGCCGG GACCCCCGAC GCCACCCGAG TGCCCGTGAA CCTCCTGCTG CGGGACCTGT ATGCGTACTG A
|
Protein sequence | MQVRTTRVAR WGVPLATAAL ALVGSTSAAA APTTTERGDG GVEITGHRGS GGLSPENTVP SFLMGRVQGS DWIEIDVQLS ADDVPFLFHD ATPARTTDVE DVFPDRATDP ITSFTWDELR RLDAGSYFDD LYTGTRIPGL RDAAWIAGGS SGINIELKSP ENSPGVEQVL ADALATDPLW QRLVDRGLVV VSSFDETSLR AFHELAPAVP VLQVGAVPDD ATLAEWATWA DGVVTNYRLL ADADVARVQG FGLDLNVYTV NAPDAMQRMI DLGVDGIITD FPGTLARLEA GRDPLPLANG IEVAEVNANV PGDDLQPETG EHVVLTNTTD APVDVSGWTL QDAVINRLAI GEGYVIPPGG TLRVYTASGT NAPDAYYNGG TRTVLNNDGD SIAVIAGTPD ATRVPVNLLL RDLYAY
|
| |