| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2807 |
|---|
| Symbol | |
|---|
| ID | 7861215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3134003 |
|---|
| End bp | 3135259 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866904 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002882814 |
|---|
| Protein GI | 229821288 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.297836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.17261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACC GCGCCGAGGA GCCGCCCGCG CCGCCGTCGG AGGTCGCCGG TGCGCCGGGC
CGGAGGTCGG CCGGCGGCCC GGCCGGGACG TCGCCCACCG TCCAGCTCGC GCTCGCCACC
GTCGGGTTCG CCGTCAACTT CTGGGCGTGG GCACTGATCA GCCCGCTGGG GGCGGCGTAC
AAGGAGGACC TCGGCCTCAC CGACGTCGAG CAGTCCATCG TCGTCGCGAT CCCGGTCATC
GTGGGCTCGC TCGGTCGCAT CCCCGTCGGC GCGCTCACCG ACCGGCTCGG CGCCCACGTG
ATGTTCCCCG TCGTCAGCGT GCTGACGATC GTCCCGGTCC TGTTCATCGC CCTCGTCGCC
GACTCGCTCG CCATGCTCGT GATCGGGGGC TTCCTGCTCG GCATCGGCGG CACGGCGTTC
GCCGTCGGCG TCCCGTTCGT CAACGCCTGG TACCCGCCGG CGCGACGCGG CACGGCGATC
GGCATCTTCG GGATGGGCAT GGGCGGCACC GCGATCTCCG CCTTCACCAC GCTGCGGCTC
GCCGAGACGT GGGGGCGGGC GACGCCGTTC GTCGTCGTCG CCGTCGTCCT GGCGGTGTTC
GCCGTGGTCG CCTGGCTCCT CCTGCGCGAC GCCCCGGGCC GCTCGGTCGC GCCCGCCGGG
GGGATGCTCG CGCGCACGTG GGCGACGCTG CGCCTCAAGG GCACGATGCC CCTCGCGTGG
CTGTACGCCG TCGGGTTCGG CGGCTTCGTG GCGTTCTCCG TGTACCTCCC GACGTTCCTC
GTCAACGCGT ATGACCTGAC GCCGTCCGAC GCCGCCCTCC GCACCGCCGG CTTCGTCGTG
CTCGCGGTCG TCATGCGCCC GGTCGGCGGG GCGCTGTCGG ACCGGCTCGG GGCCATCGGC
GTGTCGGTGG TGTGCTTCGG CGTCGTCGCC GTGCTGGCGG GAGTCGTGGC GCTCGGCCCC
GCGCTCGTCC CGCTCGGCAC GATCGGCTTC CTCGGGCTGG CGGCGGCGCT CGGTGCGTCG
TCCGGAGCGA CGTTCGCCCT CGTGGCGAAG GTGGCCCCGG CGGACAAGGT CGGCGGTGTC
ACGGGGCTCG TCGGCGCGGC GGGCGGTCTC GGCGGGTTCA TCCCGCCCCT CATCATGGGT
GCGGTGTACC AGCTCGACGG GACCTACGGC CTCGGGCTCG GTCTGCTCGC CCTGACGGCG
TTGCTCACCG TGTTCTTCAC GCTGGGTCCC GTCCGCCGGG CCGCCCGCCC CTCGTGA
|
|---|
| Protein sequence | MSHRAEEPPA PPSEVAGAPG RRSAGGPAGT SPTVQLALAT VGFAVNFWAW ALISPLGAAY
KEDLGLTDVE QSIVVAIPVI VGSLGRIPVG ALTDRLGAHV MFPVVSVLTI VPVLFIALVA
DSLAMLVIGG FLLGIGGTAF AVGVPFVNAW YPPARRGTAI GIFGMGMGGT AISAFTTLRL
AETWGRATPF VVVAVVLAVF AVVAWLLLRD APGRSVAPAG GMLARTWATL RLKGTMPLAW
LYAVGFGGFV AFSVYLPTFL VNAYDLTPSD AALRTAGFVV LAVVMRPVGG ALSDRLGAIG
VSVVCFGVVA VLAGVVALGP ALVPLGTIGF LGLAAALGAS SGATFALVAK VAPADKVGGV
TGLVGAAGGL GGFIPPLIMG AVYQLDGTYG LGLGLLALTA LLTVFFTLGP VRRAARPS
|
|---|
| |