Gene Bcav_2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2703 
Symbol 
ID7861589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3004789 
End bp3006060 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID643866800 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002882710 
Protein GI229821184 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.830349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.531916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA CCACAGCAGC CGTGGCCGCG ACGACGGCGA CGCTGGCGCT CGCCCTCGCC 
GCCTGCTCCG GCGGTGGAGG GAACGAGGGC GGGACCGGCG ACGACGGCGG CGAGGCACCC
GCCGGGCCGA TCGCGTTCTA CACGGACAAG GCGGCGTGGG AGCCGAGCTT CGACGCCATG
AACGAGGCGT CCGGCGACCT CACGCTCGAG TTCACCGGCT ACTCCGACGC GGCGGCGTAC
GACGCGTTCA TCAAGCAGGC GTTCCGCACG GACGCCCCGC CGGCCCTGTT CACCTGGCAC
ACGGGCGACT CGCTCGCGGA GCTGGTCGAG GAGGGCCTGG TCGCCGAGAC CACGGAGCTG
TGGGACGCCG CGATCGAGAA CGGCGACGTG CCCGAGGACC TGGCCGCCGA CTACACCTAC
GACGGCAAGC AGTACTGCGT GCCGCTCAAC ATCGCCTACT GGGTCATGTA CTACAACAAG
GCGATCTTCG AGGAGAACGG GATCGAGGTG CCGACCACCT GGGACGAGCT CATCGCCGCC
GCCGACACGC TGGTGGCCGC GGGCGTCATC CCGTTCCACC AGATGAACAT CATCTTCGAG
TTCGTGTGGT TCCAGGCGAA CCTGCTCGGT CTCGACCCGG AGGCGTACCA GGGCCTGTCG
ACCGGCGACA CGTCCTACAC CGACCCCGTC GTGGTCGAGG CCATGGAGAA CTGGCAGTCG
ATGATGGCGG ACGGCTACTT CATCGACCCG GGCGTGCAGA CGGACCCGCA GACGCTGCTG
TCCACCGGTG AGGTGGCCAT GGCGTACTTC GGCACGTTCT TCACGGGCCA GCTCACCGCC
ATCGACCAGG TCTCCGGCGA GGACTACGGC ATCTTCCCGA TGCCCAGCGT GGACGACGGC
GTCGGGCCGC AGATGGTGGT CGAGACCGGT CCGCTCTGCG CGGCCGCCGC AGGACCCGAC
GTCGATGCCG CGCTCGACTA CAGCGCGTGG TGGATGACGG CGGACGCCCA GCAGGCCTGG
GCCGACGAGC GCGGCGAGAT CAGCTTCAAC CCGGCCGTCA CGATCGAGGA CCCGGAGCTG
TCCGCCATCA CGGACGCCGT CGGCGCCGGC GACTTCCAGC TCCAGCAGCG CTACCTCGAG
GCCACGCCGG CACCGATCTA CACCGTGTCG GCGAGCGTGT TCGGCGACTT CGTCACGAAC
TACCCCGACG ACGTCATGCC GGCGCTCGAG CAGATCCAGG CCGAGGCGGA CTCCTACTGG
GCGAGCGAGT GA
 
Protein sequence
MRKTTAAVAA TTATLALALA ACSGGGGNEG GTGDDGGEAP AGPIAFYTDK AAWEPSFDAM 
NEASGDLTLE FTGYSDAAAY DAFIKQAFRT DAPPALFTWH TGDSLAELVE EGLVAETTEL
WDAAIENGDV PEDLAADYTY DGKQYCVPLN IAYWVMYYNK AIFEENGIEV PTTWDELIAA
ADTLVAAGVI PFHQMNIIFE FVWFQANLLG LDPEAYQGLS TGDTSYTDPV VVEAMENWQS
MMADGYFIDP GVQTDPQTLL STGEVAMAYF GTFFTGQLTA IDQVSGEDYG IFPMPSVDDG
VGPQMVVETG PLCAAAAGPD VDAALDYSAW WMTADAQQAW ADERGEISFN PAVTIEDPEL
SAITDAVGAG DFQLQQRYLE ATPAPIYTVS ASVFGDFVTN YPDDVMPALE QIQAEADSYW
ASE