Gene Bcav_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2598 
Symbol 
ID7860765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2890398 
End bp2891039 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID643866689 
ProductEndopeptidase Clp 
Protein accessionYP_002882605 
Protein GI229821079 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACA TGCCCCAGGC CATTTCCCAG GGCGCCCCCC GGGCCGCAGG CTCGGACAAC 
CAGAGCTTCG CCCTCGGCGA CCACATCTAC AACCGCCTCC TCAAGGAGCG CATCATCTGG
CTCGGGTCGG AGGTGCGCGA CGACAACGCG AACCAGATCT GCGGGCAGAT GATGCTGCTC
GCAGCGGAGG ACCCGACCAA GGACATCTGG CTCTACATCA ACTCGCCGGG CGGGTCCGTG
ACGGCCGGCA TGGCCATCTA CGACACGATG CAGTACGTCC AGCCGGACGT CGCGACGGTC
GCGATGGGCA TGGCGGCCTC GATGGGCCAG TTCCTGCTCG CCTCGGGCGC GAAGGGCAAG
CGGTACGCGA CGCCGCACGC GCGCGTCATG ATGCACCAGC CCTCGGGCGG CATCGGCGGC
ACGGCGACGG ACATCCGGAT CAACGCGGAG CTCATCCTCC ACATGAAGCG CGTGATGGCG
GAGCTGACCG CCGAGCAGAC CGGCAAGACC GTCGAGCAGG TCAACGCGGA CGCCGACCGC
GACCGCTGGT TCACGGCCGA GGAGGCGCGC GAGTACGGCT TCATCGACCA CGTCGTCACC
CACGCAGCGT CCGTGGCCGG CGGCGGCGGC ACCACAGACT GA
 
Protein sequence
MSDMPQAISQ GAPRAAGSDN QSFALGDHIY NRLLKERIIW LGSEVRDDNA NQICGQMMLL 
AAEDPTKDIW LYINSPGGSV TAGMAIYDTM QYVQPDVATV AMGMAASMGQ FLLASGAKGK
RYATPHARVM MHQPSGGIGG TATDIRINAE LILHMKRVMA ELTAEQTGKT VEQVNADADR
DRWFTAEEAR EYGFIDHVVT HAASVAGGGG TTD