Gene Bcav_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2566 
Symbol 
ID7860733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2852219 
End bp2853106 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content76% 
IMG OID643866657 
Producthypothetical protein 
Protein accessionYP_002882573 
Protein GI229821047 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.767502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0363066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA CCGCCGCTGC CTCGTCGCGG AAAAGCACGA CCGTTCGTGC CACGAAGGTC 
CCCTGGCGCC TGCGTGCCGC GTTCCGCACG CTCGACGTCG TCGCCCCCGG GCCGGCCGCA
CGCTGGGCGC TGGAGCTCTG GTGCACGATC CCGGTGGGGT CCGCCAGCCG GATGGACACC
CGACCGCACC TCGGGGCGAT CTCCCGGCTG AGCCGCGCCG AGGGCGACGT CGTGGTCGAG
ACGTGGGGAA GGGCCGACGG CGCGCCCGTG TACCTCGTGC ACGGGTGGGG CGGCTGGCGC
GGGCAGCTCG GCGCGTTCGT CGACCCGCTC GTGGCCGCGG GCTTCCGCGT GGTCGCGTTC
GACGCCCCGA GCCACGGCGA GTCCGCCCCG GGGGCGTTCG GACCCCGCCG CAGCACGGCG
GTCGAGATGG CGGCCGCGTT CACGGACGTC GCCCGTGAGC ACGGCGCGCC CGACGCCGTC
GTCGCTCACT CCCTCGGCAC GGCGACGACC ACCCTGGCCG TCTCCGACGG GCTGCCCGCC
CGGCGCCTCG TGCTCGTCGC GCCGGCCGTC GACCCGATGA ACGAGGTGGC CGAGTTCCAG
CGGGCCCTCG GCTTCGGGCC ACGCACGCGG CGTCGTCTCG ACCCCCGGCT GGAGCGGCGG
GCGGGCAGGC CGTTGACGGA CATCTCGATC GCGGCGGCTA CGTCGCGCCT GCCCACGACG
CTCCTGGTGC ACGACAGGGG CGACCGGCGC CTCGCGTTCG AGAGCACCGC GCGGCTCGCC
GCCGGCTGGC CCTCCGCCCA GCTGGAGGCG ACCGAGGGCT TGGGCCACCA GCGGATCCTG
GCTGACGACG CCGTCGTGGG GCGCGTCGTG GAGTTCGTGC GGTCCTGA
 
Protein sequence
MSTTAAASSR KSTTVRATKV PWRLRAAFRT LDVVAPGPAA RWALELWCTI PVGSASRMDT 
RPHLGAISRL SRAEGDVVVE TWGRADGAPV YLVHGWGGWR GQLGAFVDPL VAAGFRVVAF
DAPSHGESAP GAFGPRRSTA VEMAAAFTDV AREHGAPDAV VAHSLGTATT TLAVSDGLPA
RRLVLVAPAV DPMNEVAEFQ RALGFGPRTR RRLDPRLERR AGRPLTDISI AAATSRLPTT
LLVHDRGDRR LAFESTARLA AGWPSAQLEA TEGLGHQRIL ADDAVVGRVV EFVRS