| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2560 |
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| Symbol | |
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| ID | 7857852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2846705 |
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| End bp | 2848378 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643866652 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002882568 |
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| Protein GI | 229821042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.577395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.137403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCACA CCGCTCCCGC GCCCACGGGG AAACCACTGA TCGTGCTCAA CCAGCGCACG
ATCTGGGTGA TCTTCGGCGC CCTCATGGCG AGCATGTTCC TGTCCTCGCT CGACCAGTCG
ATCGTCGGCA CGGCGATGCC GACGATCGTG GGCGAGCTGC ACGGCGTCGA GCACCAGGGC
TGGGTCGTGA CCGCCTACAT CCTGGCCGTC GCCATCGTCA TGCCGCTGTA CGGCAAGTTC
GGTGACATGT GGGGCCGGCG GTGGCCGTTC CTCGTCGCGA TCACGCTGTT CACCGTCGCC
TCGGCGGGCG CCGGCTTCGC GAACTCCTTC CCGGAGCTCG TGGCGTGGCG CGGCATCCAG
GGCCTCGGCG GCGGCGGACT CATGATCCTG TCGCAGGCGA TCATCGCCGA CATCGTGCCC
GCCAAGGACC GCGGCAAGTA CATGGGTCCG ATGGGTGCGC TGTTCGGGAT CGCAGCCGTG
GTCGGACCGC TGCTGGGCGG CTGGTTCACC GAAGGGCCCG GCTGGCGCTG GGCGTTCTGG
ATCAACGTCC CGATCGGGAT CGCCGCGTTC GCCGTCGCCT GGGTCGCGCT CAAGCTGCCG
TCGCACCGGG CAGGCAAGAA GATCGACGTC GCCGGCATCT TCTTCATGGT CGTGGCGACG
TCCGGGATCG TCCTCGTGAC CAGCTGGGAG TCCCTGACGT CGCAGCGCGG CTACGACTGG
AGCGACCCGT GGCTCATCGG GCTCGTCGCT GCGGTGATCG TCTCGATCGC CGGCTTCATC
ATCGCGGAGA ACCGGGCAGA GGAGCCGCTC CTGCCGCTGA AGCTGTTCAA GAACCGCACG
TTCACGATCG CCACGCTCAT CGGCCTCGTG CTCGGCATGG GCATGTTCTC GGCGCTGGCG
TTCCTCCCGA CGTTCCTGCA GATGTCCACC GGCGCCGGTG TCACCGAGTC CGGATGGCTC
ATGCTGCCGA TGATGGCGGG CGTCATGCTC ACGGCCATCG GCTCCGGTAT CGCGATCACG
AAGACCGGGA AGTACAAGAT GTTCCCGGTC GTCGGACTCG CGATCACCGT CGCGGGCATG
GTCTGGCTGA CCCGGATCAC CGGCGACATG TCGATGCTCC TGTTCGGCGC CATGATCTTC
GTGCTCGGCG CCGGCATGGG TCTCGTGATG CAGACGATCG TGCTCGCCGT GCAGAACTCC
GTCGACCCGC ACGAGATCGG CACAGCGACC AGCGCGAACA ACTTCTTCCG CGAGATCGGG
GCGGCGGTCG GCGTCGCGCT GTTCAGCACG ATCTTCACGT CGCGGCTGAC GGACAACCTC
GGGGAGGTCT TCGCCGACCT CCCGCCCGGG ACCGTGCCCG AGGGCGCCGA CGGTGCGTCG
CTGACCCCGG ACGTCGTGAA GGCCCTGCCG GAGCCGATCC ACACCGGCGT CGTCGACGCG
TTCACCGACG CTCTCGCACC CTCGTTCTGG TACCTCATCC CGCTCGTCGT GCTCGGCTTC
GTGCTGGCGC TGTTCCTGCG GGAGATCAAG CTCTCCGACA CCGCGGGGAT GGTGGCCCGC
GGCGAGGCGG TCGTGGAGGG CGACGAGCTC GACGTCGTGG CCGGCGACGC GGGGCGGTCC
GGTGAGCCGG GAGACGGCGA CCCGCTCGCG GAACGCGAGC CCGCGCGTCA GTAG
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| Protein sequence | MSHTAPAPTG KPLIVLNQRT IWVIFGALMA SMFLSSLDQS IVGTAMPTIV GELHGVEHQG
WVVTAYILAV AIVMPLYGKF GDMWGRRWPF LVAITLFTVA SAGAGFANSF PELVAWRGIQ
GLGGGGLMIL SQAIIADIVP AKDRGKYMGP MGALFGIAAV VGPLLGGWFT EGPGWRWAFW
INVPIGIAAF AVAWVALKLP SHRAGKKIDV AGIFFMVVAT SGIVLVTSWE SLTSQRGYDW
SDPWLIGLVA AVIVSIAGFI IAENRAEEPL LPLKLFKNRT FTIATLIGLV LGMGMFSALA
FLPTFLQMST GAGVTESGWL MLPMMAGVML TAIGSGIAIT KTGKYKMFPV VGLAITVAGM
VWLTRITGDM SMLLFGAMIF VLGAGMGLVM QTIVLAVQNS VDPHEIGTAT SANNFFREIG
AAVGVALFST IFTSRLTDNL GEVFADLPPG TVPEGADGAS LTPDVVKALP EPIHTGVVDA
FTDALAPSFW YLIPLVVLGF VLALFLREIK LSDTAGMVAR GEAVVEGDEL DVVAGDAGRS
GEPGDGDPLA EREPARQ
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