Gene Bcav_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2540 
Symbol 
ID7857832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2825728 
End bp2826186 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID643866633 
Productribosomal protein S16 
Protein accessionYP_002882549 
Protein GI229821023 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.212486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.121755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTCA AGATCCGTCT CAAGCGTCTC GGCAAGATCC GGGCGCCGTA CTACCGCGTC 
GTCGTCGCCG ACTCCCGTAC CCGTCGGGAC GGGCGAGTCA TCGAGGAGAT CGGCAAGTAC
CACCCGACCG AGGACCCCTC GGTCATCGAC ATCGCCTCTG AGCGGGCCCA GTACTGGCTC
GGCGTCGGCG CGCAGCCGAC CGAGCAGGTG CTCGCCCTCC TCAAGGTCAC CGGCGACTGG
CAGAAGTTCA AGGGTCTCCC GGGCGCCGAG GGCACGCTGC GCGTCAAGGA CGGCGCCGCT
GCCGCGTCCC CCGACGCCGC CAAGGAGAAG GTCGCCGCGA TCGAGGCCGA GGCCGAGAAG
CACAAGGCGA AGGCCTCCGA GAAGAAGGCC GCTGCCGCCG CGTCGGCCGA CGAGGCCGGC
TCCGCCGCTG CCGACGACGC CGAGGGATCC GAGTCCTGA
 
Protein sequence
MAVKIRLKRL GKIRAPYYRV VVADSRTRRD GRVIEEIGKY HPTEDPSVID IASERAQYWL 
GVGAQPTEQV LALLKVTGDW QKFKGLPGAE GTLRVKDGAA AASPDAAKEK VAAIEAEAEK
HKAKASEKKA AAAASADEAG SAAADDAEGS ES