Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2509 |
Symbol | |
ID | 7857801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2802831 |
End bp | 2803973 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643866605 |
Product | integrase family protein |
Protein accession | YP_002882521 |
Protein GI | 229820995 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.593152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.73908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCCG AGTTATGTGC CAACGTAGCG CACAACTCAT ACATTCCCGT ACGACTTAAG GAGGGTGCGT GGCACCGACA CGTCGGGTTC GCCTCGGAGT GGCGTCGCGG GACGCGAGCG GCGGCAGGGC ACGGTGGGTC GGTGGCCGCT GACCATCCTC GCGACTCGGC GGCGCCGAGG GCGTCGCACC ATCCGCCGTC GCGCCCGGGC GACGCGGCGC TCGTCGAGCG GTACGCGCTG CACCTCGAGG CGCAGCGCGG GCTCTCCGCT CACACGGTGC GCGCCTACAC CTCCGACGTC GCCGACCTGC TGGCGGAGCT TCCGCCGACG GGCGACGAGC CGAACGGCGC CGACCTGACG CGGCTCGATC TCGTGGCTCT GCGTCGCTGG CTCGCGCGGC AGGCGCGCGC CGGCCTCGCC CGCTCCACCC TGGCGCGGCG GAGCGCGTCG GCGCGGACGT TCACCGCGTG GGCGCACCGC GCAGGTCTGC TCGCGGAGGA CGTCGGTGCA CGCCTGCGGA GCCCTCGGGC GGACGTGGTC GTCCCCGTGG TGCTCACCGA GGCGGACGCC GCCACCGTGC TCGACGGCGT GAGGGCCGAC GACGGCGGCG TCGGCGCGGA CGACGACGAG GGCGAGAGGT CCGCCCTCGC CCTTCGCGAC AGCGCGATGC TCGAGCTCCT GTACGGCGCG GCCCTGCGCG TGTCCGAGCT CGCCGGCCTG GACACCGGCG ACGTCGACCT GCGCGAGCGG CTCGTCCGCG TGCTCGGCAA GGGTGCGAAG GAACGCGTCG TCCCGTTCGG GCTGCCGGCG GCGCGCGCGA TCGAGGCGTG GATCAGCGTG CGTCCGGAGC TCGCCGGGCC GCGGAGCGGG CGGGCGCTGT TCCTCGGCGC ACGCGGCGGC CGGATCGATC CACGCGTCGT CCGCGACGTC GTCCACCGGG CGACGGCGCG GGCGGGGGTG CGGGACCTCG CACCGCACGG GCTGCGGCAC TCTGCTGCCA CGCATCTGCT CGCCGGAGGT TCCGACCTGC GCTCCGTGCA GGAGATCCTC GGCCACGCCT CGCTCGCGAC CACGCAGCGC TACACCCACG TCACGCCCGA GCGCCTGCGC GCCGCGTTCC GTCAGGCTCA CCCGCGCGCC TGA
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Protein sequence | MLSELCANVA HNSYIPVRLK EGAWHRHVGF ASEWRRGTRA AAGHGGSVAA DHPRDSAAPR ASHHPPSRPG DAALVERYAL HLEAQRGLSA HTVRAYTSDV ADLLAELPPT GDEPNGADLT RLDLVALRRW LARQARAGLA RSTLARRSAS ARTFTAWAHR AGLLAEDVGA RLRSPRADVV VPVVLTEADA ATVLDGVRAD DGGVGADDDE GERSALALRD SAMLELLYGA ALRVSELAGL DTGDVDLRER LVRVLGKGAK ERVVPFGLPA ARAIEAWISV RPELAGPRSG RALFLGARGG RIDPRVVRDV VHRATARAGV RDLAPHGLRH SAATHLLAGG SDLRSVQEIL GHASLATTQR YTHVTPERLR AAFRQAHPRA
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